Sequence of DPV Sweet potato chlorotic stunt virus
Sweet potato chlorotic stunt virus P22 gene, segment RNA 1, genomic RNA, strain busia
ACC No: HE575407
Dated: 2012-01-10 | Length: 576 | CRC: -239381490
ID HE575407; SV 1; linear; genomic RNA; STD; VRL; 576 BP. XX AC HE575407; XX DT 10-JAN-2012 (Rel. 111, Created) DT 10-JAN-2012 (Rel. 111, Last updated, Version 1) XX DE Sweet potato chlorotic stunt virus P22 gene, segment RNA 1, genomic RNA, DE strain busia XX KW . XX OS Sweet potato chlorotic stunt virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Crinivirus. XX RN [1] RP 1-576 RA Otto B.; RT ; RL Submitted (19-JUL-2011) to the INSDC. RL Natural Resources Institute, University of Greenwich, Chatham Maritime, RL Kent, ME7 4BT, UNITED KINGDOM. XX RN [2] RA Wasswa P., Otto B., Gibson R., Maruthi M.; RT "'The occurrence and characteristics of a mild strain of Sweet potato RT chlorotic stunt virus'"; RL Unpublished. XX FH Key Location/Qualifiers FH FT source 1. .576 FT /organism="Sweet potato chlorotic stunt virus" FT /segment="RNA 1" FT /strain="busia" FT /mol_type="genomic RNA" FT /country="Uganda:Busia" FT /PCR_primers="fwd_name: P22-F, fwd_seq: FT ctttgaacgatgagttctgg, rev_name: P22-R, rev_seq: FT ctaccctaatatctttatcg" FT /db_xref="taxon:81931" FT CDS 1. .576 FT /codon_start=1 FT /transl_table=1 FT /gene="P22" FT /product="P22 protein" FT /function="RNAi silencing" FT /protein_id="CCC58177.1" FT /translation="MSSGAIYSELNRFLKYLRELDFSNFCFSDFLFRFSSLKSLIDEYS FT SHWLVNTNELVWYRTICEQRLHPHLFDANRLLTRINVSDLKHDLIMIRDHFSSIDDFLN FT KYPAIPILVSFTKNISAFLEDNEWESVIHHTDSLNRLVFRESWSDGYGYVNHHRLSASS FT HDFQHMKLCDIFRLSKDKLNSGVFTFLL" XX SQ Sequence 576 BP; 154 A; 92 C; 110 G; 220 T; 0 other; he575407 Length: 576 10-JAN-2012 Type: N Check: 855 .. 1 atgagttctg gagcaattta ctctgaactt aatcgttttc ttaagtatct 51 tagggagtta gattttagta atttttgttt tagtgatttt ttgtttcgtt 101 tttcttccct aaaatcacta atcgatgagt atagtagtca ttggttagta 151 aatacgaatg aattagtctg gtatagaaca atctgtgagc aacgattgca 201 tcctcatctt ttcgatgcaa acaggttgtt aacacggata aatgtttcag 251 atttgaagca tgacttgata atgattcgtg atcatttttc gagtattgat 301 gattttctaa acaagtatcc ggctatacca attcttgtct cattcaccaa 351 aaatattagt gcgtttttag aagataatga gtgggaatcc gttattcatc 401 atacggactc actcaatcgt cttgttttcc gagagtcgtg gtcagacggt 451 tatggttacg ttaaccacca tcgtctttca gcgtcgtcgc atgattttca 501 acatatgaag ttatgtgata tttttcgttt gtccaaggat aagttgaaca 551 gtggtgtgtt cactttcctt ctttaa