Sequence of DPV Shuni virus

Aino virus N and NSs genes, segment S, genomic RNA, isolate 38K

ACC No: HE795089

Dated: 2012-08-20 | Length: 834 | CRC: -1501717034

                
ID   HE795089; SV 1; linear; genomic RNA; STD; VRL; 834 BP.
XX
AC   HE795089;
XX
DT   20-AUG-2012 (Rel. 113, Created)
DT   20-AUG-2012 (Rel. 113, Last updated, Version 1)
XX
DE   Aino virus N and NSs genes, segment S, genomic RNA, isolate 38K
XX
KW   .
XX
OS   Aino virus
OC   Viruses; ssRNA negative-strand viruses; Bunyaviridae; Orthobunyavirus.
XX
RN   [1]
RP   1-834
RA   Hoeper D.;
RT   ;
RL   Submitted (19-MAR-2012) to the INSDC.
RL   Friedrich-Loeffler-Institute, Federal Resaerch Institute for Animal Health,
RL   Institue of Diagnostic Virology, Suedufer 10, Greifswald - Insel Riems
RL   17493, GERMANY.
XX
RN   [2]
RX   DOI; org/10.3201/eid1810.120835.
RA   Goller K., Hoeper D., Schirrmeier H., Mettenleiter T.C., Beer M.;
RT   "Schmallenberg virus as possible ancestor of Shamonda virus";
RL   Emerg. Infect. Dis. 0:0-0(2012).
XX
CC   related sequences HE795087, HE795088.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .834
FT                   /organism="Aino virus"
FT                   /segment="S"
FT                   /isolate="38K"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:11582"
FT   CDS             26. .727
FT                   /gene="N"
FT                   /product="nucleocapsid protein"
FT                   /protein_id="CCG93469.1"
FT                   /translation="MANQFIFQDVPQRNLATFNPEVGYVAFIAKHGAQLNFDTVRVFFL
FT                   NQKKAKMVLSKTAQPSVDLTFGGIKFTLVNNHFPQYTANPVPDTALTLHRLSGYLAKWV
FT                   ADQCKTNQIKLAEAMEKIVMPLAEVKGCTWTEGLTMYLGFAPGAEMFLETFEFYPLVID
FT                   MHRVLKDGMDVNFMRKVLRQRYGTLTAEQWMTQKIDAVRAAFNAVGQLSWAKSGFSPAA
FT                   RAFLAQFGINI"
FT   CDS             51. .326
FT                   /gene="NSs"
FT                   /product="non-structural protein"
FT                   /protein_id="CCG93470.1"
FT                   /translation="MFLNGISLRLTRRSGMWHLLLNMGPNSISIPLESSSSIRRRPRWY
FT                   SVRRHNQVLILHLVASSLHWLITIFPNTQQILCQTLPSLSIVSQDI"
XX
SQ   Sequence 834 BP; 233 A; 195 C; 175 G; 231 T; 0 other;

he795089 Length: 834  20-AUG-2012  Type: N  Check: 9339  ..

       1  ctccactata gaacaaagct tttaaatggc aaaccaattt attttccaag
      51  atgttcctca acggaatctc gctacgttta acccggaggt cgggtatgtg
     101  gcatttattg ctaaacatgg ggcccaactc aatttcgata ccgttagagt
     151  cttcttcctc aatcagaaga aggccaagat ggtactcagt aagacggcac
     201  aaccaagtgt tgatcttaca tttggtggca tcaagtttac actggttaat
     251  aaccattttc cccaatacac agcaaatcct gtgccagaca ctgccctcac
     301  tctccatcgt ctctcaggat atctagcaaa atgggttgca gaccaatgta
     351  aaacgaatca gattaaattg gctgaggcca tggaaaaaat tgtcatgcca
     401  ctggctgaag tgaaaggttg cacctggact gaagggctga ctatgtatct
     451  gggatttgca ccaggtgctg aaatgttttt agaaacattt gaattctacc
     501  ctttggttat tgatatgcac agagtgctga aggatggaat ggatgtcaac
     551  ttcatgagga aggtccttcg ccagcgctac ggcacattga ctgcagaaca
     601  gtggatgact caaaaaatag atgctgtccg tgcagccttc aatgctgttg
     651  ggcagctaag ctgggctaaa tcaggattct caccagctgc tagagccttc
     701  cttgcccaat ttggcataaa catctaaatt cctgtaaaac cccacccctt
     751  cccccagtat ggtgttccaa aacaccatac gccattcctg cagcattgtt
     801  tatttctttc tattgattgt tctatgtgga gcac