Sequence of DPV Simbu virus
Simbu virus Gn-Gc-NSm gene for M polyprotein, segment M, genomic RNA, isolate SA Ar 53
ACC No: HE795109
Dated: 2012-08-20 | Length: 4417 | CRC: -624890267
ID HE795109; SV 1; linear; genomic RNA; STD; VRL; 4417 BP.
XX
AC HE795109;
XX
DT 20-AUG-2012 (Rel. 113, Created)
DT 20-AUG-2012 (Rel. 113, Last updated, Version 1)
XX
DE Simbu virus Gn-Gc-NSm gene for M polyprotein, segment M, genomic RNA,
DE isolate SA Ar 53
XX
KW .
XX
OS Simbu virus
OC Viruses; ssRNA negative-strand viruses; Bunyaviridae; Orthobunyavirus.
XX
RN [1]
RP 1-4417
RA Hoeper D.;
RT ;
RL Submitted (19-MAR-2012) to the INSDC.
RL Friedrich-Loeffler-Institute, Federal Resaerch Institute for Animal Health,
RL Institue of Diagnostic Virology, Suedufer 10, Greifswald - Insel Riems
RL 17493, GERMANY.
XX
RN [2]
RX DOI; org/10.3201/eid1810.120835.
RA Goller K., Hoeper D., Schirrmeier H., Mettenleiter T.C., Beer M.;
RT "Schmallenberg virus as possible ancestor of Shamonda virus";
RL Emerg. Infect. Dis. 0:0-0(2012).
XX
CC related sequences HE795108, HE795110.
XX
FH Key Location/Qualifiers
FH
FT source 1. .4417
FT /organism="Simbu virus"
FT /segment="M"
FT /isolate="SA Ar 53"
FT /mol_type="genomic RNA"
FT /db_xref="taxon:35306"
FT CDS 14. .4243
FT /gene="Gn-Gc-NSm"
FT /product="M polyprotein"
FT /protein_id="CCG93496.1"
FT /translation="MPSYVGFTILLCATIVASLPLREGTTGSRCFSNGDLVKTINTSTV
FT VSEVCLKDDISLIKSIGEHYKVGNQLAAVLKYFRLYQVKDWHTCNPILDEHGTFMIMNV
FT QEDGLLMPKMHTCRVECDISVNKETGEIVLHSYRLNHYRIAGTIQQAGWFKNKIEIPLE
FT NTCENIEITCGLKTMNVHACFRQHKSCTRYFKGSLMPELMIESICTNIELILLTTFILV
FT SSIIMMILTKTYIVYILIPLFYPFVKVYGIIYNKYFKLCKKCLLAVHPFSDCPTTCICG
FT MVYNNTESLKLHRLCSNCTGYRALTKSRRLCKSKGWNIFLCICFGLIFFSFITPVQSEC
FT FKFEDLTQEFKSCLSENAQIKERESNNIKTIIAVLVILLTLMAFKIPIVNVYQMITITK
FT CKFCGMLHYKKNLKVGEGYTNKCLFCICSEDKGLVAHTARESCKYYSTKNIDKVFTILL
FT IVILVILIKPIYGTSTDCREFRVDEPTIEQISKCLAIYQNKTSSDRKEQVIESLKQYAT
FT KEEIESLNIPDDYEELNTKIEQFTVLEGKIFLEYYKSQTLSEDVNGIKILNDPQNIKWK
FT MYIKHRTMNLCMPHSYKYICRCIHSFKYCSSTATDHESEITTYYRDKAAEYTHDLNLLL
FT DAIKYAVPGLGASILDQIKKDKDYDNIPHITGKLQVYAKNNIHLLGILKFIDHMRSLSV
FT TGLQKGSARLKTIKSISSEPVLRANTVGESPITSCYQAKKATCVSPKGVGTPNQYLLCQ
FT SKLYLWPMDGVYVSNRNPSEHCADDTHCHIPINPPKDDISKKVCREHNIETNTDIYSKS
FT VTECSVEKFGTCNVKSVTWQIAVCNGVYYYTSARQHAKGHDITSYCLTASCTEARYPFR
FT KRLCTQTVWDTTYRDKVHIKKLSHTNIENYIAAIQSELSNDLSTHSYRPLKNLPKVIPT
FT YKSISIQGDESKTGVRNAFVKSSLPAITGVSTGLNVKFKDGSELFSLVVFVKKIIVKAT
FT YRHIYTTGPTVGINTKHNEICTGTCPKTIPGEKNWLTFSKEHTSNWGCEEWGCLAIGAG
FT CLYGSCQDILKPELRVYKKVGTETREVEVCITMPHETFCNLVDVLQPLISERVQISLET
FT VDVKQLPTLIGIKNGKVLVGDINDLGNTAKKCGSVQITSDSVIGSGTPKFDYICHAAQR
FT KDVIVRRCYDNAYDSCRFLQEDPNYNIAQGTATELHLKTANIGQIDFKVMLGDFDYDVV
FT SRDSTVIINSIKCAGCSDCVEEMACALNIQAESSTTCKVTSNCELYMDRIILDPAVNDY
FT SLKLSCKKDIKIIKVAVCKSASETIPILKQSSVKLDLTSLDESAYIQEHDKKCGTWLCR
FT VKEEGLSIIFEPIFGKISYYWKIFIAVTSAIIGLLALVYICFPVCKRLKGLLEQNERIY
FT QMETKFK"
XX
SQ Sequence 4417 BP; 1606 A; 695 C; 820 G; 1296 T; 0 other;
he795109 Length: 4417 20-AUG-2012 Type: N Check: 3896 ..
1 taccacaaat aacatgcctt cttacgttgg atttacaatt ctcttgtgtg
51 ccacaattgt ggcctcatta ccattaagag aagggactac tggaagtaga
101 tgcttctcga atggtgactt agttaaaacc atcaacactt ccacggtagt
151 atcggaggtt tgcttaaaag atgacatatc attaattaaa tctattggtg
201 aacattataa agttggcaat caattggcag cagtactgaa atactttaga
251 ctttatcaag ttaaagattg gcatacctgt aatcccatat tagatgagca
301 tggtacattc atgattatga atgtacagga agatggcctt cttatgccta
351 agatgcatac atgtagggtt gagtgtgata tttcagtcaa taaggaaaca
401 ggggagattg ttttacattc atatagactc aaccactacc gtattgctgg
451 cacaatccag caggctggct ggtttaaaaa caaaatagaa ataccattag
501 aaaatacatg cgaaaatata gaaataacat gtgggcttaa aaccatgaat
551 gtccatgcat gctttagaca acataaatct tgtacaaggt attttaaagg
601 ctctttaatg ccagaactaa tgatagaatc tatttgcaca aatatagaac
651 taatactatt aaccacattt atattggtct ctagtataat tatgatgata
701 ctaacaaaaa cttatattgt ttatatacta ataccattat tttacccgtt
751 tgtaaaagta tatgggatca tatataataa atactttaaa ttatgtaaaa
801 aatgccttct tgctgtgcat ccattttctg attgtccaac aacttgtatt
851 tgtggaatgg tttacaataa cactgagtcg ctaaaactac acaggttatg
901 ttctaactgt acaggatata gggcattaac aaaatctaga aggttatgca
951 aaagcaaagg ctggaatatc tttttatgca tatgttttgg gttaatattc
1001 ttctccttta taacaccagt gcagtctgag tgttttaaat tcgaggattt
1051 aactcaggaa ttcaaaagtt gtttgtcaga aaatgcacaa ataaaggaaa
1101 gagaatcaaa caatataaaa accattattg ctgtgcttgt aatattatta
1151 acactaatgg catttaagat tcctattgtt aatgtttatc aaatgattac
1201 cattacaaag tgtaaatttt gtggaatgct tcattataag aaaaacctta
1251 aagtagggga aggttatact aacaagtgcc ttttttgtat ttgctctgaa
1301 gacaagggct tggttgctca tactgcaaga gaaagctgta aatactatag
1351 tactaaaaat attgataaag tatttacaat tttgctgata gttatactag
1401 tgattttaat taaaccaata tacggaacat ctacagactg tagagaattt
1451 agagttgatg aacctacaat agaacaaatc tcaaaatgtt tagctatata
1501 ccaaaataaa acaagtagtg atagaaaaga gcaggtaatt gaatcattaa
1551 aacagtatgc tacaaaagag gagattgaga gtttaaatat cccagatgat
1601 tatgaagagc tgaatactaa gatagaacaa tttacagttt tagaaggaaa
1651 aatcttctta gaatactata agtctcaaac gttatcagaa gatgtaaacg
1701 gaattaagat tttaaacgac ccccagaaca ttaaatggaa gatgtacata
1751 aaacatagga caatgaacct gtgtatgcca cactcatata agtacatatg
1801 tagatgcata cattcattta agtattgttc tagcacagca actgatcatg
1851 agagtgaaat aaccacttac tatagagata aagcagctga atatacgcat
1901 gatttgaacc tattgttgga tgcaataaag tatgctgttc caggcctagg
1951 tgcttcaata ctagatcaaa tcaaaaaaga taaggactat gataatatcc
2001 cacacataac tggcaaattg caggtctatg caaaaaataa tattcatttg
2051 ttaggaatcc taaaatttat agaccatatg agaagtttaa gtgttactgg
2101 tcttcagaaa ggttcagcaa gattaaaaac aattaagtca atatcttctg
2151 aaccggtact aagagcaaat actgtaggag aaagtcctat cacatcatgc
2201 taccaagcaa aaaaagcaac atgtgtctcg cccaagggtg tggggacacc
2251 aaatcaatac ctattgtgcc agagtaaatt atatttatgg cctatggatg
2301 gagtttatgt gagcaatcgg aatccttctg aacattgcgc tgatgacacc
2351 cattgccata taccaataaa tccaccaaaa gatgatattt caaagaaagt
2401 ttgtagggaa cataatatag aaactaatac agacatttac tctaaatcag
2451 tgacagagtg ttcagttgaa aaatttggaa catgcaatgt taaaagtgta
2501 acatggcaaa tagcagtgtg caatggtgtc tactactata caagtgccag
2551 gcagcatgct aagggtcatg atataacatc ctactgttta acagcaagct
2601 gcactgaagc tagatatcca tttaggaaaa gactttgtac tcaaacggta
2651 tgggacacaa cttataggga taaagtacat ataaagaaac tatcccacac
2701 taacatagaa aattatattg ctgcaataca atcagaacta tctaatgacc
2751 tctcaacaca ttcgtataga ccattaaaaa acctccctaa ggttataccc
2801 acatataaat ctatatccat acaaggtgat gaatcaaaaa caggtgtcag
2851 aaatgcattt gtaaagtcaa gtctgcctgc aataacaggg gtatcaacgg
2901 gattaaatgt aaaatttaaa gacggatcag aattgttttc tttagtggtt
2951 tttgttaaaa aaataatagt taaagcaaca tataggcata tttatacaac
3001 aggtccaaca gtagggatca atactaagca caatgagatt tgtactggta
3051 catgcccgaa aacaattcct ggagaaaaga attggttaac attctcaaaa
3101 gaacacacta gcaattgggg ttgtgaagag tggggttgct tagcaattgg
3151 ggcaggctgc ctatatggct catgtcaaga tatattaaaa cctgaattaa
3201 gagtgtataa aaaggttggg actgagactc gcgaagtaga agtttgtatc
3251 acaatgcctc atgaaacatt ctgtaatcta gttgatgtgc ttcaaccatt
3301 aattagtgag agagttcaga tctctctaga gactgtagat gtcaaacagt
3351 tgccaacatt aataggaata aaaaatggga aagtattagt tggcgatatt
3401 aatgatttgg gtaatacagc aaaaaagtgc gggtctgttc aaataacatc
3451 agatagtgtt attggttctg gaacaccgaa atttgactat atttgccatg
3501 ctgcacagag aaaagatgtt atagtgaggc gatgctatga caatgcatat
3551 gattcatgca ggtttctcca agaagatcca aattacaata tagctcaagg
3601 gacagccact gaattgcatc tgaagactgc aaatataggt caaattgatt
3651 ttaaagttat gcttggagat ttcgattacg atgttgtctc tagagattca
3701 acagtcatta taaattctat taaatgtgca gggtgctcag attgtgttga
3751 agaaatggca tgcgcattaa atatacaagc agaatcttct accacatgca
3801 aggtaacatc aaattgtgaa ttatatatgg acaggatcat tttagaccca
3851 gctgtgaatg attacagcct taaactctca tgcaaaaaag atataaaaat
3901 aataaaagtt gcagtctgca aatctgcctc agaaacaata ccaatcctaa
3951 agcagagtag cgttaagcta gatctaacta gtttagatga gtctgcatac
4001 atccaggagc atgacaaaaa gtgtggaaca tggttatgta gggtaaagga
4051 ggaaggactg tcaataatct tcgagcccat ttttgggaaa attagctatt
4101 attggaagat ttttatagca gtaacttctg cgatcattgg attgcttgca
4151 ctagtatata tctgtttccc agtttgcaag aggttaaaag ggctactcga
4201 acagaacgag agaatatacc agatggaaac aaaattcaaa taatctgagg
4251 aaaataaaca ttggtttata ttaattagtt gcttgattta atttccaatt
4301 atcatgttaa taaattcatt ccaaaattta tttcaaaatt aggggctttg
4351 cctcaagttt gctgctaaga agttgctata tgtggtagca cactactcgt
4401 cgcggcgtag cgtccgc