Sequence of DPV Rice yellow mottle virus

Rice yellow mottle virus ORF1 gene for P1 protein, genomic RNA, isolate Ma206

ACC No: HE795650

Dated: 2013-05-22 | Length: 474 | CRC: 1143918343

                
ID   HE795650; SV 1; linear; genomic RNA; STD; VRL; 474 BP.
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AC   HE795650;
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DT   22-MAY-2013 (Rel. 116, Created)
DT   22-MAY-2013 (Rel. 116, Last updated, Version 1)
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DE   Rice yellow mottle virus ORF1 gene for P1 protein, genomic RNA, isolate
DE   Ma206
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KW   .
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OS   Rice yellow mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Sobemovirus.
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RN   [1]
RP   1-474
RA   Sereme D.;
RT   ;
RL   Submitted (22-MAR-2012) to the INSDC.
RL   INERA, Production Vegetale, BP 476 Ouagadougou 01, 01, BURKINA FASO.
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RN   [2]
RA   Sereme D., Lacombe S., Konate M., Bangratz M., Pinel-Galzi A., Fargette D.,
RA   Traore A.S., Konate G., Brugidou C.;
RT   "Sites under positive selection in the RNA silencing modulate the
RT   suppressor activity of Rice yellow mottle virus movement protein P1";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .474
FT                   /organism="Rice yellow mottle virus"
FT                   /isolate="Ma206"
FT                   /serotype="Ser-sa"
FT                   /mol_type="genomic RNA"
FT                   /country="Mali"
FT                   /db_xref="taxon:31744"
FT   CDS             1. .474
FT                   /transl_table=1
FT                   /gene="ORF1"
FT                   /product="P1 protein"
FT                   /function="putative movement and gene silencing
FT                   suppression"
FT                   /protein_id="CCG97790.1"
FT                   /translation="MTRLEVLIRPTQQTVAKAITAGYTHALTWVWHSQTWDVDAVNDPV
FT                   LSADFNPEKVGWVSVSFACTQCTAHYYTSEQVKYFINIPPVHYDVVCADCERSVQQDDE
FT                   IDREHDERNAEISACNARALSEGRPASLVYLSRDACDIPEHSGTCRFDKYLNF"
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SQ   Sequence 474 BP; 109 A; 124 C; 128 G; 113 T; 0 other;

he795650 Length: 474  22-MAY-2013  Type: N  Check: 7729  ..

       1  atgacacggt tggaagttct tatacgaccg actcagcaga ctgtggcaaa
      51  agccatcacc gcgggctata cgcacgcact cacctgggtt tggcattctc
     101  agacctggga cgttgacgca gtgaacgatc ctgttctcag cgccgacttc
     151  aaccctgaaa aggttggttg ggtgtctgtg tcgtttgcct gtactcagtg
     201  tacggctcac tactacacaa gtgagcaggt gaagtatttc atcaatattc
     251  cgcctgtcca ctacgacgta gtgtgtgccg attgcgagcg cagtgttcag
     301  caggacgacg agatcgaccg cgagcacgac gagcgtaacg cagagatttc
     351  cgcctgcaac gctcgagctt tgagcgaggg aagaccagca agtttggttt
     401  acctttctcg ggacgcttgt gatatacctg agcactccgg aacgtgccgg
     451  tttgacaaat acctcaattt ctga