Sequence of DPV Sida golden mosaic Florida virus
Sida golden mosaic Florida virus segment DNA-B isolate 04B_1_C1207 complete sequence
ACC No: HE806443
Dated: 2012-10-26 | Length: 2631 | CRC: -898357512
ID HE806443; SV 1; circular; genomic DNA; STD; VRL; 2631 BP.
XX
AC HE806443;
XX
DT 26-OCT-2012 (Rel. 114, Created)
DT 26-OCT-2012 (Rel. 114, Last updated, Version 1)
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DE Sida golden mosaic Florida virus segment DNA-B isolate 04B_1_C1207 complete
DE sequence
XX
KW complete viral segment.
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OS Sida golden mosaic Florida virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-2631
RA Jeske H.;
RT ;
RL Submitted (02-MAY-2012) to the INSDC.
RL Molecular biology and virology of plants, University of Stuttgart,
RL Pfaffenwaldring 57, Stuttgart, D-70550, GERMANY.
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RN [2]
RA Jeske H., Kober S., Schaefer B., Strohmeier S.;
RT "High fidelity circomics of Cuban geminiviruses reveals the first
RT alpha-satellite DNA in Central America";
RL Unpublished.
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FH Key Location/Qualifiers
FH
FT source 1. .2631
FT /organism="Sida golden mosaic Florida virus"
FT /segment="DNA-B"
FT /host="Sida spp."
FT /isolate="04B_1_C1207"
FT /mol_type="genomic DNA"
FT /country="Cuba:Pinar del Rio"
FT /collection_date="Aug-2007"
FT /db_xref="taxon:223314"
FT CDS 392. .1162
FT /transl_table=1
FT /gene="BV1"
FT /product="NSP"
FT /note="nuclear shuttle protein"
FT /protein_id="CCH63326.1"
FT /translation="MYPFRSKRGSYFSNRRFNSRNTVFNRFTAVKRHDGKRRGAISTKP
FT SDEPKMSAQRIHENQYGPNFVMAHNTATSTFISYPDLGKMEPNRSRSYIKLKRLRFKGT
FT VKIERVQSDMNMDGSVPKVEGVFSLVVVVDRKPHLGPSGCLHTFDELFGARIHSHGNLS
FT IAPSLKDRYYIRHVFKRVLSVEKDTLMADVEGSTTLSNRRFNCWSTFKDIDRDSCKGVY
FT DNISKNALLIYYCWMSDTPSKASTYVSFDLDYIG"
FT CDS complement(1224. .2105)
FT /transl_table=1
FT /gene="BC1"
FT /product="MP"
FT /note="movement protein"
FT /protein_id="CCH63327.1"
FT /translation="MESQLVNPPNAFNYIESHRDEYQLSHDLTEIILQFPSTASQLTAR
FT LSRSCMKIDHCVIEYRQQVPINATGTVIVEIHDKRMTDNESLQASWTFPIRCNIDLHYF
FT SASFFSLKDPIPWKLYYRVCDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILS
FT KQFTDKDVDFSHVDYGKWERKPIRCASMSRVGLRGPIEIRPGESWASRSTIGTGHSDAD
FT SEMENEIHPYRHLNRLGTSVLDPGESASIVGAQRAESNITMSMGQLNELVRTTVQECIN
FT SNCQASQAKSLK"
XX
SQ Sequence 2631 BP; 676 A; 546 C; 595 G; 814 T; 0 other;
he806443 Length: 2631 26-OCT-2012 Type: N Check: 5064 ..
1 acccggatgg ccgcgccccc cctttcggtg ccgtacactc tccccgcgcg
51 gtaccctttt gttgttttgt cacgcgccct ctcattggtg caggttcttc
101 acgccccgtc tttttgagta gcctttaatt caaattaaag gagaattatt
151 gtcgcgcgaa ttgctttaat aattagaatt attgtcgcgc gatgactgac
201 tatggcccat tgtacctggt gaaggacgtg gcgaaaattg gaccttgctg
251 ctgagtctat ttgcgattaa tgttgaacga tttatctata tagtgcatgt
301 gttgagttat gtcatgttta ttttactcag cggcttacca cgtttatatc
351 tttagctttt tttgtgttta atcctccttg attgtttgat catgtatcct
401 tttaggagta aacgtggttc ttatttctct aaccgacggt ttaactcacg
451 taacactgtg ttcaaccgtt ttaccgccgt aaaacgacat gatgggaaac
501 gtcgaggagc tatctctact aagcccagtg atgagcccaa gatgtcagcc
551 caacgcatac atgagaatca gtatgggcca aattttgtta tggcccataa
601 tacagctact tctacgttca ttagttatcc agacttgggc aagatggaac
651 cgaaccgaag caggtcatac atcaagttga aacgactccg tttcaaaggg
701 actgtgaaga ttgaacgtgt tcaatcggat atgaacatgg acgggtctgt
751 ccccaaagtt gaaggagtct tctcgcttgt tgttgttgtg gatcggaaac
801 cacacttggg accctctggt tgtctgcata cattcgacga gctgttcggt
851 gcaaggatcc acagtcatgg caatctcagc attgcccctt ctctcaaaga
901 tcgttattac attcgacacg tgttcaagcg tgtactgtcc gtggagaagg
951 atacgctgat ggccgacgtt gaaggatcta caactctctc taacaggcgt
1001 tttaattgtt ggtccacttt taaggacatt gatcgtgatt cgtgtaaggg
1051 tgtttatgat aatataagca agaacgccct gttaatttat tattgttgga
1101 tgtccgatac gccttcaaag gcatccactt atgtatcttt tgatcttgat
1151 tatattggtt aagtcaataa atatcgttta tctaaagctg attatcttaa
1201 tatgagaaat caaaagataa catttatttc aaagatttgg cctgtgaagc
1251 ctgacagtta ctattaatac attcttggac cgttgtccta actagttcgt
1301 ttagctgacc catggacatt gtgatgttgg attccgctct ctgggctccc
1351 acaattgaag cagactctcc tggatctaga acactggtcc ccagtctgtt
1401 caggtgtctg tatggatgga tctcgttctc catctccgag tccgcatctg
1451 aatggcccgt acctatagta ctcctggaag cccatgactc accaggcctt
1501 atttcaattg ggcctcgtaa cccaactctg gacatggacg cgcatctgat
1551 gggcttcctc tcccatttcc cataatccac atgggagaag tccacatctt
1601 tgtctgtgaa ctgtttggat aggatcttca ccgttggtgc cctgaatggg
1651 atgtcgacgg agtgtttcgc tgtggacagt ttcagtttcc ctttgaattt
1701 ggcgaagtgg gtcctctgat gaacatttgt atcgcagacc ctgtagtata
1751 acttccatgg aattggatcc ttcaacgaaa agaacgaagc cgagaaatag
1801 tggagatcta tgttgcatct gatcggaaaa gtccacgacg cctgtaaaga
1851 ctcattgtct gtcattcttt tgtcgtggat ctccacgatt accgtcccgg
1901 tggcgttgat cggcacctgt tgtctgtatt ctatgacgca gtgatcgatc
1951 ttcatacagc tacgactgag tctagctgtt aattgcgacg ccgtcgaagg
2001 aaattgcaga attatctcag ttaggtcatg tgaaagctga tactcgtccc
2051 ggtgagactc tatgtaatta aaagcgttcg gaggatttac taactgagat
2101 tccatctgaa taaaaaaggc cgcgcagcgg caccgattgc tgaagttgaa
2151 tcgggaagaa gatgaacaac tgatgaagaa gatgaacaac ttatgaacaa
2201 gaagaacaag tttcgatgga tctcttctga tctctaagaa tggaaaggaa
2251 gaactttctt tctgtgtttg acaatgtcgg atatttccga cttttgctgt
2301 gtttgagaat gcttgaagaa ttgaaagcgt tttagaataa actgtttttg
2351 agaaagaaaa gagatttgat gaagaatttg agagaaattt gataattgaa
2401 gattttgtat gtgaacccag acgttctggg ttgttgggta tttatattgg
2451 gaaagtgttt attaaccgat ggcattttcg taataagaag gggtactcca
2501 attggggtac tccaattgag ctctctcaaa cttgctcaag caattggagt
2551 attggagtaa cttatatact agaaccctca atagaactct caatctcgtt
2601 cgcacacgtg gcggccatcc gatataatat t