Sequence of DPV Pepper golden mosaic virus

Pepper golden mosaic virus cp gene for coat protein, isolate PGBER121W2008

ACC No: HE967550

Dated: 2013-04-12 | Length: 756 | CRC: 1382421572

                
ID   HE967550; SV 1; linear; genomic DNA; STD; VRL; 756 BP.
XX
AC   HE967550;
XX
DT   05-OCT-2012 (Rel. 114, Created)
DT   12-APR-2013 (Rel. 116, Last updated, Version 2)
XX
DE   Pepper golden mosaic virus cp gene for coat protein, isolate PGBER121W2008
XX
KW   .
XX
OS   Pepper golden mosaic virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-756
RA   Fraile A.;
RT   ;
RL   Submitted (20-JUL-2012) to the INSDC.
RL   Biotecnologia, Centro de Biotecnologia y Genomica de Plantas UPM-, Campus
RL   de Montegancedo, E-28223 Pozuelo de Alarcon (Madrid), SPAIN.
XX
RN   [2]
RX   DOI; 10.1111/mec.12232.
RX   PUBMED; 23379795.
RA   Rodelo-Urrego M., Pagan I., Gonzalez-Jara P., Betancourt M.,
RA   Moreno-Letelier A., Ayllon M.A., Fraile A., Pinero D., Garcia-Arenal F.;
RT   "Landscape heterogeneity shapes host-parasite interactions and results in
RT   apparent plant-virus codivergence";
RL   Mol. Ecol. 22(8):2325-2340(2013).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .756
FT                   /organism="Pepper golden mosaic virus"
FT                   /host="Capsicum annuum var. glabriusculum (chiltepin)"
FT                   /isolate="PGBER121W2008"
FT                   /mol_type="genomic DNA"
FT                   /country="Mexico:Queretaro, Bernal"
FT                   /collection_date="2008"
FT                   /db_xref="taxon:223301"
FT   CDS             1. .756
FT                   /transl_table=1
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /db_xref="GOA:K0N5U8"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:K0N5U8"
FT                   /protein_id="CCJ67871.1"
FT                   /translation="MVKRDAPWRLMAGTSKVSRSANYSRGTGMGPKFDKAAAWVNRPMY
FT                   RKPRIYRTYRSADVPRGCEGPCKVQSFEQRHDISHVGKVMCISDVTRGNGITHRVGKRF
FT                   CVKSAYVLGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMYDNEPSTATV
FT                   KNDLRDRYQVMHRFSAKVTGGQYASNEQALVRRFWKVNNYVVYNHQEAGKYENHTENAL
FT                   LLYMACTHASNPVYATLKIRIYFYDSITN"
XX
SQ   Sequence 756 BP; 197 A; 167 C; 203 G; 189 T; 0 other;

he967550 Length: 756  12-APR-2013  Type: N  Check: 3624  ..

       1  atggttaagc gggatgcccc atggcgttta atggcgggga cctctaaggt
      51  ttcccgctct gccaattatt cacgtggcac gggtatgggc cctaaattcg
     101  ataaggccgc tgcttgggtt aacaggccca tgtacaggaa gcccaggata
     151  tatcgtacgt atagaagcgc agatgtgcct agaggttgtg aagggccttg
     201  taaggtccag tccttcgagc agcggcatga tatctcacat gttggcaagg
     251  tcatgtgcat ttcggacgtg acacgtggta acggcattac tcatcgtgtg
     301  ggcaagcgtt tctgcgtcaa gtctgcatac gttttgggta agatatggat
     351  ggacgagaat atcaagctca agaaccacac taacagcgtc atgttctggc
     401  tcgtgagaga taggagacca tatggtaccc ctatggattt tgggcaggtt
     451  ttcaacatgt atgacaacga gcccagtaca gccactgtga agaacgatct
     501  tcgtgatcgt taccaagtca tgcacaggtt ctccgcgaaa gtcacaggtg
     551  gccagtatgc cagcaacgag caggcgttgg ttaggcgctt ttggaaggtg
     601  aacaactacg tcgtgtacaa ccaccaggaa gctggcaaat acgagaatca
     651  tacggagaac gccctgttat tgtatatggc atgtactcat gcctctaacc
     701  ctgtgtacgc gacattgaaa attcggatct atttttatga ttcgataaca
     751  aattaa