Sequence of DPV Pepper golden mosaic virus
Pepper golden mosaic virus cp gene for coat protein, isolate PGBER121W2008
ACC No: HE967550
Dated: 2013-04-12 | Length: 756 | CRC: 1382421572
ID HE967550; SV 1; linear; genomic DNA; STD; VRL; 756 BP. XX AC HE967550; XX DT 05-OCT-2012 (Rel. 114, Created) DT 12-APR-2013 (Rel. 116, Last updated, Version 2) XX DE Pepper golden mosaic virus cp gene for coat protein, isolate PGBER121W2008 XX KW . XX OS Pepper golden mosaic virus OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-756 RA Fraile A.; RT ; RL Submitted (20-JUL-2012) to the INSDC. RL Biotecnologia, Centro de Biotecnologia y Genomica de Plantas UPM-, Campus RL de Montegancedo, E-28223 Pozuelo de Alarcon (Madrid), SPAIN. XX RN [2] RX DOI; 10.1111/mec.12232. RX PUBMED; 23379795. RA Rodelo-Urrego M., Pagan I., Gonzalez-Jara P., Betancourt M., RA Moreno-Letelier A., Ayllon M.A., Fraile A., Pinero D., Garcia-Arenal F.; RT "Landscape heterogeneity shapes host-parasite interactions and results in RT apparent plant-virus codivergence"; RL Mol. Ecol. 22(8):2325-2340(2013). XX FH Key Location/Qualifiers FH FT source 1. .756 FT /organism="Pepper golden mosaic virus" FT /host="Capsicum annuum var. glabriusculum (chiltepin)" FT /isolate="PGBER121W2008" FT /mol_type="genomic DNA" FT /country="Mexico:Queretaro, Bernal" FT /collection_date="2008" FT /db_xref="taxon:223301" FT CDS 1. .756 FT /transl_table=1 FT /gene="cp" FT /product="coat protein" FT /db_xref="GOA:K0N5U8" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:K0N5U8" FT /protein_id="CCJ67871.1" FT /translation="MVKRDAPWRLMAGTSKVSRSANYSRGTGMGPKFDKAAAWVNRPMY FT RKPRIYRTYRSADVPRGCEGPCKVQSFEQRHDISHVGKVMCISDVTRGNGITHRVGKRF FT CVKSAYVLGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMYDNEPSTATV FT KNDLRDRYQVMHRFSAKVTGGQYASNEQALVRRFWKVNNYVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSITN" XX SQ Sequence 756 BP; 197 A; 167 C; 203 G; 189 T; 0 other; he967550 Length: 756 12-APR-2013 Type: N Check: 3624 .. 1 atggttaagc gggatgcccc atggcgttta atggcgggga cctctaaggt 51 ttcccgctct gccaattatt cacgtggcac gggtatgggc cctaaattcg 101 ataaggccgc tgcttgggtt aacaggccca tgtacaggaa gcccaggata 151 tatcgtacgt atagaagcgc agatgtgcct agaggttgtg aagggccttg 201 taaggtccag tccttcgagc agcggcatga tatctcacat gttggcaagg 251 tcatgtgcat ttcggacgtg acacgtggta acggcattac tcatcgtgtg 301 ggcaagcgtt tctgcgtcaa gtctgcatac gttttgggta agatatggat 351 ggacgagaat atcaagctca agaaccacac taacagcgtc atgttctggc 401 tcgtgagaga taggagacca tatggtaccc ctatggattt tgggcaggtt 451 ttcaacatgt atgacaacga gcccagtaca gccactgtga agaacgatct 501 tcgtgatcgt taccaagtca tgcacaggtt ctccgcgaaa gtcacaggtg 551 gccagtatgc cagcaacgag caggcgttgg ttaggcgctt ttggaaggtg 601 aacaactacg tcgtgtacaa ccaccaggaa gctggcaaat acgagaatca 651 tacggagaac gccctgttat tgtatatggc atgtactcat gcctctaacc 701 ctgtgtacgc gacattgaaa attcggatct atttttatga ttcgataaca 751 aattaa