Sequence of DPV Pepper huasteco yellow vein virus
Pepper huasteco yellow vein virus cp gene for coat protein, isolate PHDZI18W2008
ACC No: HE967651
Dated: 2013-04-12 | Length: 756 | CRC: 1764175269
ID HE967651; SV 1; linear; genomic DNA; STD; VRL; 756 BP. XX AC HE967651; XX DT 05-OCT-2012 (Rel. 114, Created) DT 12-APR-2013 (Rel. 116, Last updated, Version 2) XX DE Pepper huasteco yellow vein virus cp gene for coat protein, isolate DE PHDZI18W2008 XX KW . XX OS Pepper huasteco yellow vein virus OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-756 RA Fraile A.; RT ; RL Submitted (20-JUL-2012) to the INSDC. RL Biotecnologia, Centro de Biotecnologia y Genomica de Plantas UPM-, Campus RL de Montegancedo, E-28223 Pozuelo de Alarcon (Madrid), SPAIN. XX RN [2] RX DOI; 10.1111/mec.12232. RX PUBMED; 23379795. RA Rodelo-Urrego M., Pagan I., Gonzalez-Jara P., Betancourt M., RA Moreno-Letelier A., Ayllon M.A., Fraile A., Pinero D., Garcia-Arenal F.; RT "Landscape heterogeneity shapes host-parasite interactions and results in RT apparent plant-virus codivergence"; RL Mol. Ecol. 22(8):2325-2340(2013). XX FH Key Location/Qualifiers FH FT source 1. .756 FT /organism="Pepper huasteco yellow vein virus" FT /host="Capsicum annuum var. glabriusculum (chiltepin)" FT /isolate="PHDZI18W2008" FT /mol_type="genomic DNA" FT /country="Mexico:Yucatan, Dzibilchaltun" FT /collection_date="2008" FT /db_xref="taxon:223303" FT CDS 1. .756 FT /transl_table=1 FT /gene="cp" FT /product="coat protein" FT /db_xref="GOA:K0N3Q4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:K0N3Q4" FT /protein_id="CCJ67972.1" FT /translation="MPKRDAPWRLTAGTAKISRTGNSSRALIMAPSTSRASAWVNRPMY FT RKPRIYRMYRSPDVPKVCEGPCKVQSFEQRHDVSHVGKVICISDVTRGNGITHRVGKRF FT CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMYDNEPSTATV FT KNDLRDRYQVMHRFYAKVTGGQYASNEQALVRRFWKVNNHVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRVYFYDSIMN" XX SQ Sequence 756 BP; 203 A; 155 C; 188 G; 210 T; 0 other; he967651 Length: 756 12-APR-2013 Type: N Check: 1529 .. 1 atgcctaagc gtgatgctcc gtggcgatta acagcgggga ccgcaaagat 51 tagccgaact ggcaacagtt cacgggctct tatcatggcc ccgagtacta 101 gcagggcctc agcttgggtt aatcgcccaa tgtacaggaa gccccggatt 151 tatcgtatgt acagatctcc tgatgtgccg aaagtttgtg aagggccgtg 201 taaggtccaa tcgtttgaac aacgacatga tgtctctcat gttggtaagg 251 ttatttgtat atccgacgtc actcgtggta atggtattac ccatcgtgtt 301 ggcaagcgat tttgcgttaa gtccgtctac attcttggca aaatctggat 351 ggatgaaaat attaagttga agaaccatac caacagtgtc atgttttggt 401 tggttaggga tcggagaccc tacggtacgc ctatggattt tggccaagtt 451 tttaatatgt atgacaatga gcccagcacc gccactgtga agaacgatct 501 tcgggatcgt tatcaagtta tgcataggtt ctatgctaag gtcacaggtg 551 ggcaatatgc cagcaacgag caagctttgg ttaggcgttt ctggaaggtt 601 aacaaccatg ttgtgtacaa ccatcaggaa gctggcaaat atgagaacca 651 cactgagaat gcgctgttat tgtatatggc atgtacgcat gcatcaaatc 701 ctgtatatgc aaccctcaaa attcgggtct atttttatga ctcgataatg 751 aattaa