Sequence of DPV Pepper huasteco yellow vein virus

Pepper huasteco yellow vein virus cp gene for coat protein, isolate PHTUL59W2009

ACC No: HE967672

Dated: 2013-04-12 | Length: 756 | CRC: -136561819

                
ID   HE967672; SV 1; linear; genomic DNA; STD; VRL; 756 BP.
XX
AC   HE967672;
XX
DT   05-OCT-2012 (Rel. 114, Created)
DT   12-APR-2013 (Rel. 116, Last updated, Version 2)
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DE   Pepper huasteco yellow vein virus cp gene for coat protein, isolate
DE   PHTUL59W2009
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KW   .
XX
OS   Pepper huasteco yellow vein virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN   [1]
RP   1-756
RA   Fraile A.;
RT   ;
RL   Submitted (20-JUL-2012) to the INSDC.
RL   Biotecnologia, Centro de Biotecnologia y Genomica de Plantas UPM-, Campus
RL   de Montegancedo, E-28223 Pozuelo de Alarcon (Madrid), SPAIN.
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RN   [2]
RX   DOI; 10.1111/mec.12232.
RX   PUBMED; 23379795.
RA   Rodelo-Urrego M., Pagan I., Gonzalez-Jara P., Betancourt M.,
RA   Moreno-Letelier A., Ayllon M.A., Fraile A., Pinero D., Garcia-Arenal F.;
RT   "Landscape heterogeneity shapes host-parasite interactions and results in
RT   apparent plant-virus codivergence";
RL   Mol. Ecol. 22(8):2325-2340(2013).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .756
FT                   /organism="Pepper huasteco yellow vein virus"
FT                   /host="Capsicum annuum var. glabriusculum (chiltepin)"
FT                   /isolate="PHTUL59W2009"
FT                   /mol_type="genomic DNA"
FT                   /country="Mexico:Tamaulipas, Tula"
FT                   /collection_date="2009"
FT                   /db_xref="taxon:223303"
FT   CDS             1. .756
FT                   /transl_table=1
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /db_xref="GOA:K0N0L7"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:K0N0L7"
FT                   /protein_id="CCJ67993.1"
FT                   /translation="MPKREAPWRLTAGTTKISRTGNSSRALIMGPTTSRASAWVNRPMY
FT                   RKPRIYRMYRSPDVPKGCEGPCKVQSFEQRHDVSHVGKVICISDVTRGNGITHRVGKRF
FT                   CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMYDNEPSTATV
FT                   KNDLRDRYQVMHRFYAKVTGGQYASNEQALVRRFWKVNNHVVYNHQEAGKYENHTENAL
FT                   LLYMACTHASNPVYATLKIRVYFYDSIMN"
XX
SQ   Sequence 756 BP; 200 A; 159 C; 193 G; 204 T; 0 other;

he967672 Length: 756  12-APR-2013  Type: N  Check: 8289  ..

       1  atgcctaagc gtgaagctcc ttggcgatta acggcgggga ccaccaagat
      51  tagccgaact ggcaatagtt cgcgggctct tatcatgggc ccgactacca
     101  gcagggcctc agcttgggtt aatcgcccaa tgtacaggaa gccccggatt
     151  tatcgtatgt acagatctcc ggatgtgccg aaaggttgtg aagggccgtg
     201  taaggtccaa tcgtttgagc aacgacatga tgtctctcat gttggtaagg
     251  ttatttgtat atccgacgtc actcgtggta atggtattac ccatcgtgtt
     301  ggcaaacgat tctgcgttaa gtccgtctat attctgggca aaatctggat
     351  ggatgaaaat attaagttga agaaccatac caacagtgtc atgttttggt
     401  tggttaggga tcggagaccc tacggtacgc ctatggattt tggccaagtg
     451  tttaacatgt atgacaatga gcccagcacc gccactgtga agaacgatct
     501  tcgggatcgt tatcaagtta tgcataggtt ctatgctaag gtcactggtg
     551  ggcaatatgc cagcaacgag caagctttgg tgcggcgttt ctggaaggtc
     601  aacaaccatg ttgtgtacaa ccatcaggaa gctggcaaat atgagaacca
     651  cactgagaat gcgctgttat tgtatatggc atgtacgcat gcatcaaatc
     701  ctgtatatgc aaccctcaaa attcgggtct atttttatga ctcgataatg
     751  aattaa