Sequence of DPV Pepper huasteco yellow vein virus

Pepper huasteco yellow vein virus cp gene for coat protein, isolate PHLIB112C2009

ACC No: HE967692

Dated: 2013-04-12 | Length: 756 | CRC: 1751296501

                
ID   HE967692; SV 1; linear; genomic DNA; STD; VRL; 756 BP.
XX
AC   HE967692;
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DT   05-OCT-2012 (Rel. 114, Created)
DT   12-APR-2013 (Rel. 116, Last updated, Version 2)
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DE   Pepper huasteco yellow vein virus cp gene for coat protein, isolate
DE   PHLIB112C2009
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KW   .
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OS   Pepper huasteco yellow vein virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN   [1]
RP   1-756
RA   Fraile A.;
RT   ;
RL   Submitted (20-JUL-2012) to the INSDC.
RL   Biotecnologia, Centro de Biotecnologia y Genomica de Plantas UPM-, Campus
RL   de Montegancedo, E-28223 Pozuelo de Alarcon (Madrid), SPAIN.
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RN   [2]
RX   DOI; 10.1111/mec.12232.
RX   PUBMED; 23379795.
RA   Rodelo-Urrego M., Pagan I., Gonzalez-Jara P., Betancourt M.,
RA   Moreno-Letelier A., Ayllon M.A., Fraile A., Pinero D., Garcia-Arenal F.;
RT   "Landscape heterogeneity shapes host-parasite interactions and results in
RT   apparent plant-virus codivergence";
RL   Mol. Ecol. 22(8):2325-2340(2013).
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FH   Key             Location/Qualifiers
FH
FT   source          1. .756
FT                   /organism="Pepper huasteco yellow vein virus"
FT                   /host="Capsicum annuum var. glabriusculum (chiltepin)"
FT                   /isolate="PHLIB112C2009"
FT                   /mol_type="genomic DNA"
FT                   /country="Mexico:Nayarit, La Libertad"
FT                   /isolation_source="Monoculture"
FT                   /collection_date="2009"
FT                   /db_xref="taxon:223303"
FT   CDS             1. .756
FT                   /transl_table=1
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /db_xref="GOA:K0MRB9"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="UniProtKB/TrEMBL:K0MRB9"
FT                   /protein_id="CCJ68013.1"
FT                   /translation="MPKRDAPWRLTAGTAKISRTGNSSRALIMAPTTSRASAWVNRPMY
FT                   RKPRIYRMYRTPDVPKGCEGPCKVQSFEQRHDVSHVGKVICISDVTRGNGITHRVGKRF
FT                   CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMYDNEPSTATV
FT                   KNDLRDRYQVMHRFYAKVTGGQYASNEQALVRRFWKVNNHVVYNHQEAGKYENHTENAL
FT                   LLYMACTHASNPVYATLKIRVYFYDSITN"
XX
SQ   Sequence 756 BP; 206 A; 160 C; 185 G; 205 T; 0 other;

he967692 Length: 756  12-APR-2013  Type: N  Check: 8752  ..

       1  atgcctaaac gtgatgctcc ttggcgatta acggcgggga ccgccaagat
      51  tagccgaact ggcaatagtt cacgggccct tatcatggcc ccgactacca
     101  gcagggcctc agcttgggtt aatcgcccaa tgtacaggaa gccccggatt
     151  tatcgtatgt acagaactcc ggatgttccg aaaggttgtg aagggccgtg
     201  taaggtccaa tcgtttgaac aacgccatga tgtgtctcat gttggtaagg
     251  ttatttgtat atccgacgtc actcgtggta atggtattac ccatcgtgtt
     301  ggcaaacgat tctgtgttaa gtccgtctat attcttggca aaatctggat
     351  ggacgaaaat attaagttga agaaccacac caacagtgtc atgttttggt
     401  tggttaggga taggagaccc tacggtacgc ctatggattt tggccaagtt
     451  tttaacatgt acgacaacga gcccagtacc gctactgtga agaacgatct
     501  tcgtgatcgt tatcaagtta tgcataggtt ttatgctaag gtcacgggtg
     551  ggcaatatgc cagcaacgag caagctttgg ttaggcgttt ctggaaggtc
     601  aacaaccatg ttgtgtacaa ccatcaggaa gcaggcaaat atgagaacca
     651  cactgagaat gcactgttat tgtatatggc atgtacgcat gcatcaaatc
     701  ctgtatatgc aaccctcaaa attcgggtct atttttatga ctcgataaca
     751  aattaa