Sequence of DPV Pepper huasteco yellow vein virus
Pepper huasteco yellow vein virus cp gene for coat protein, isolate PHLIB112C2009
ACC No: HE967692
Dated: 2013-04-12 | Length: 756 | CRC: 1751296501
ID HE967692; SV 1; linear; genomic DNA; STD; VRL; 756 BP. XX AC HE967692; XX DT 05-OCT-2012 (Rel. 114, Created) DT 12-APR-2013 (Rel. 116, Last updated, Version 2) XX DE Pepper huasteco yellow vein virus cp gene for coat protein, isolate DE PHLIB112C2009 XX KW . XX OS Pepper huasteco yellow vein virus OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-756 RA Fraile A.; RT ; RL Submitted (20-JUL-2012) to the INSDC. RL Biotecnologia, Centro de Biotecnologia y Genomica de Plantas UPM-, Campus RL de Montegancedo, E-28223 Pozuelo de Alarcon (Madrid), SPAIN. XX RN [2] RX DOI; 10.1111/mec.12232. RX PUBMED; 23379795. RA Rodelo-Urrego M., Pagan I., Gonzalez-Jara P., Betancourt M., RA Moreno-Letelier A., Ayllon M.A., Fraile A., Pinero D., Garcia-Arenal F.; RT "Landscape heterogeneity shapes host-parasite interactions and results in RT apparent plant-virus codivergence"; RL Mol. Ecol. 22(8):2325-2340(2013). XX FH Key Location/Qualifiers FH FT source 1. .756 FT /organism="Pepper huasteco yellow vein virus" FT /host="Capsicum annuum var. glabriusculum (chiltepin)" FT /isolate="PHLIB112C2009" FT /mol_type="genomic DNA" FT /country="Mexico:Nayarit, La Libertad" FT /isolation_source="Monoculture" FT /collection_date="2009" FT /db_xref="taxon:223303" FT CDS 1. .756 FT /transl_table=1 FT /gene="cp" FT /product="coat protein" FT /db_xref="GOA:K0MRB9" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:K0MRB9" FT /protein_id="CCJ68013.1" FT /translation="MPKRDAPWRLTAGTAKISRTGNSSRALIMAPTTSRASAWVNRPMY FT RKPRIYRMYRTPDVPKGCEGPCKVQSFEQRHDVSHVGKVICISDVTRGNGITHRVGKRF FT CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMYDNEPSTATV FT KNDLRDRYQVMHRFYAKVTGGQYASNEQALVRRFWKVNNHVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRVYFYDSITN" XX SQ Sequence 756 BP; 206 A; 160 C; 185 G; 205 T; 0 other; he967692 Length: 756 12-APR-2013 Type: N Check: 8752 .. 1 atgcctaaac gtgatgctcc ttggcgatta acggcgggga ccgccaagat 51 tagccgaact ggcaatagtt cacgggccct tatcatggcc ccgactacca 101 gcagggcctc agcttgggtt aatcgcccaa tgtacaggaa gccccggatt 151 tatcgtatgt acagaactcc ggatgttccg aaaggttgtg aagggccgtg 201 taaggtccaa tcgtttgaac aacgccatga tgtgtctcat gttggtaagg 251 ttatttgtat atccgacgtc actcgtggta atggtattac ccatcgtgtt 301 ggcaaacgat tctgtgttaa gtccgtctat attcttggca aaatctggat 351 ggacgaaaat attaagttga agaaccacac caacagtgtc atgttttggt 401 tggttaggga taggagaccc tacggtacgc ctatggattt tggccaagtt 451 tttaacatgt acgacaacga gcccagtacc gctactgtga agaacgatct 501 tcgtgatcgt tatcaagtta tgcataggtt ttatgctaag gtcacgggtg 551 ggcaatatgc cagcaacgag caagctttgg ttaggcgttt ctggaaggtc 601 aacaaccatg ttgtgtacaa ccatcaggaa gcaggcaaat atgagaacca 651 cactgagaat gcactgttat tgtatatggc atgtacgcat gcatcaaatc 701 ctgtatatgc aaccctcaaa attcgggtct atttttatga ctcgataaca 751 aattaa