Sequence of DPV Pepper huasteco yellow vein virus
Pepper huasteco yellow vein virus cp gene for coat protein, isolate PHPOT19C2009
ACC No: HE967697
Dated: 2013-04-12 | Length: 756 | CRC: 868089522
ID HE967697; SV 1; linear; genomic DNA; STD; VRL; 756 BP. XX AC HE967697; XX DT 05-OCT-2012 (Rel. 114, Created) DT 12-APR-2013 (Rel. 116, Last updated, Version 2) XX DE Pepper huasteco yellow vein virus cp gene for coat protein, isolate DE PHPOT19C2009 XX KW . XX OS Pepper huasteco yellow vein virus OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-756 RA Fraile A.; RT ; RL Submitted (20-JUL-2012) to the INSDC. RL Biotecnologia, Centro de Biotecnologia y Genomica de Plantas UPM-, Campus RL de Montegancedo, E-28223 Pozuelo de Alarcon (Madrid), SPAIN. XX RN [2] RX DOI; 10.1111/mec.12232. RX PUBMED; 23379795. RA Rodelo-Urrego M., Pagan I., Gonzalez-Jara P., Betancourt M., RA Moreno-Letelier A., Ayllon M.A., Fraile A., Pinero D., Garcia-Arenal F.; RT "Landscape heterogeneity shapes host-parasite interactions and results in RT apparent plant-virus codivergence"; RL Mol. Ecol. 22(8):2325-2340(2013). XX FH Key Location/Qualifiers FH FT source 1. .756 FT /organism="Pepper huasteco yellow vein virus" FT /host="Capsicum annuum var. glabriusculum (chiltepin)" FT /isolate="PHPOT19C2009" FT /mol_type="genomic DNA" FT /country="Mexico:Sinaloa, El Potrero" FT /isolation_source="Home Garden" FT /collection_date="2009" FT /db_xref="taxon:223303" FT CDS 1. .756 FT /transl_table=1 FT /gene="cp" FT /product="coat protein" FT /db_xref="GOA:K0N0Z6" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:K0N0Z6" FT /protein_id="CCJ68018.1" FT /translation="MPKRDAPWRLTAGTAKISRTGNSSRALIMGPTTSRASAWVNRPMY FT RKPRIYRMYRSPDVPKGCEGPCKVQSFEQRHDVSHVGKVICISDVTRGNGITHRVGKRF FT CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMYDNEPSTATV FT KNDLRDRYQVMHRFYAKVTGGQYASNEQALVRRFWKVNNHVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRVYFYDSIMN" XX SQ Sequence 756 BP; 207 A; 159 C; 194 G; 196 T; 0 other; he967697 Length: 756 12-APR-2013 Type: N Check: 3182 .. 1 atgcctaagc gtgatgctcc ttggcgatta acggcgggga ccgccaagat 51 tagccgaact ggcaatagtt cgcgggctct tatcatgggc ccgactacta 101 gcagggcctc agcttgggtt aatcgcccaa tgtacaggaa gccccggatt 151 tatcgtatgt acagatctcc ggatgtgccg aaaggttgtg aagggccgtg 201 taaggtccaa tcgtttgagc aacgacatga tgtctcgcat gttggtaagg 251 ttatttgtat atccgacgtg actcggggta atggaattac ccatcgtgtt 301 ggcaaacgat tctgcgttaa gtccgtctat attcttggca aaatttggat 351 ggatgaaaat attaaattga agaaccacac caacagcgtc atgttctggt 401 tggtaaggga taggagaccc tacggtacgc ctatggattt tggccaagtg 451 ttcaacatgt acgacaacga gcccagtacc gctactgtga agaacgatct 501 tcgtgatcgt tatcaagtca tgcacagatt ctatgctaag gtgacgggtg 551 gacaatatgc cagcaacgag caagccttag ttaggcgttt ctggaaggta 601 aacaaccatg tggtgtacaa ccatcaggag gctggcaaat atgagaacca 651 cacagaaaat gcgctattat tgtatatggc atgtactcat gcatctaatc 701 ccgtgtatgc aacgctgaaa attcgggtct atttttacga ctcgataatg 751 aattaa