Sequence of DPV Cotton leaf curl Multan betasatellite

Cotton leaf curl Burewala betasatellite, isolate GMT03, complete genome

ACC No: HE985228

Dated: 2012-09-19 | Length: 1373 | CRC: -796127331

                
ID   HE985228; SV 1; circular; genomic DNA; STD; VRL; 1373 BP.
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AC   HE985228;
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DT   19-SEP-2012 (Rel. 114, Created)
DT   19-SEP-2012 (Rel. 114, Last updated, Version 1)
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DE   Cotton leaf curl Burewala betasatellite, isolate GMT03, complete genome
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KW   complete genome.
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OS   Cotton leaf curl Burewala betasatellite
OC   Viruses; Satellites; Satellite Nucleic Acids;
OC   Single stranded DNA satellites; Betasatellites.
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RN   [1]
RP   1-1373
RA   Tahir M.;
RT   ;
RL   Submitted (10-SEP-2012) to the INSDC.
RL   Tahir M., Technology, Atta-ur-Rahman School of Applied Biosciences,
RL   National University of Sciences & Technology, 44000, PAKISTAN.
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RN   [2]
RA   Fareed I., Tahir M.;
RT   "First report of cotton leaf curl Burewalla virus infecting Ricinus
RT   communis";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1373
FT                   /organism="Cotton leaf curl Burewala betasatellite"
FT                   /host="Ricinus communis"
FT                   /isolate="GMT03"
FT                   /mol_type="genomic DNA"
FT                   /country="Pakistan:Okara"
FT                   /isolation_source="host leaves"
FT                   /collected_by="Irfan Fareed"
FT                   /collection_date="03-Jan-2012"
FT                   /clone="GMT03"
FT                   /db_xref="taxon:713092"
FT   CDS             complement(196. .552)
FT                   /gene="bc1"
FT                   /product="beta C1"
FT                   /function="symptoms determinations"
FT                   /protein_id="CCM43973.1"
FT                   /translation="MTTSGTNKEGVRFIVDVRIMENMKIFIHMRILSTKSPSLIKYEGI
FT                   VQYTYEDIHVPFDFNGFEGSIIANFLFAYNGAKIEEIEIEDIVHRLDILVLENPEILGM
FT                   DVIEPYVFNKKFTV"
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SQ   Sequence 1373 BP; 406 A; 227 C; 323 G; 417 T; 0 other;

he985228 Length: 1373  19-SEP-2012  Type: N  Check: 6346  ..

       1  accgtgggcg agcggtgacc gatggcttct tggtgggtcc cactgcttat
      51  cttgacttga tttgacttat attgggccaa tttaatgggt tgaaaatgtt
     101  tgggcctttg gaagagggtc ttttatggat tatggttctg tttgttgttg
     151  gtgataatgt gtgttaaata tgcattgctg gtttgtgttt ggaatttaaa
     201  cggtgaactt cttattgaat acgtacggtt cgattacatc cattcccaat
     251  atctctgggt tttcaagtac aagtatatca agtctgtgaa ctatatcttc
     301  tatctcgatc tcttctatct ttgccccgtt gtatgcgaat aggaaattcg
     351  ctatgatgct cccttcaaag ccgttgaagt cgaatggaac gtgtatgtct
     401  tcgtacgtgt actggacgat cccttcatac ttgattagcg atggtgactt
     451  tgtggatagt atcctcatgt gaatgaagat cttcatattc tccatgatgc
     501  gaacgtcgac tatgaatctg actccctcct tgtttgttcc actcgttgtc
     551  atttctgctt atttgatgga attgtttagt gtgcatgcat ttatagactt
     601  aatgaacaga tattttgtgt agttgtgtgg ttgtgagtga tttattatta
     651  tgtgattgtc cattaaaggg ataaagtgat gatggagacg tattacacgt
     701  gttgtcatat tggcttgaaa tctttataca tgggtttgta ccgtatatac
     751  ctatatatac ggatagaaaa cggatgagaa aaggaaaaac ggaactgaag
     801  aggaaaaacg gaactgaaga ggaaaaacaa agaaaagaaa caaggatata
     851  ttatttatga aagaaatggg agcgcagcga atcgaaacag gaaaacccaa
     901  ggaaagagaa aaaattaaaa agtaaagaga aaaaaaatat aaatacgaaa
     951  acgtcatcgt ttgagagtaa taaaaaaaaa agaaaaaaca aaaacatatc
    1001  cgaaaacgtt gtcgttagaa ggtgactgtg tggttttacc atttactgtg
    1051  tggtaaatgg taagtgattg aagagaagtt aaaaatgaag tctccaatag
    1101  gtaaattggt ctccgatata tcggagatca attggtgcct cataattggt
    1151  gttgcctaaa atacccctat ttctgtgtct ggaaggcgcg tggaagtgcg
    1201  ctgaaaaagg tgttcttctc tcacctaaaa cccgccggaa cgccaaaact
    1251  ggctgttgcc ggcatcaatt tacgacacgc gcggcggtgt gtacccctgg
    1301  gagggtaggt accactacgg ctacgcagca gccttagcta cgccggagct
    1351  tagctcgccc acgctttaat att