Sequence of DPV Citrus tristeza virus
Citrus tristeza virus partial CP gene for coat protein, isolate L-Clem1-Mor, clone 3
ACC No: HF947330
Dated: 2013-05-28 | Length: 672 | CRC: 856909577
ID HF947330; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC HF947330; XX DT 28-MAY-2013 (Rel. 116, Created) DT 28-MAY-2013 (Rel. 116, Last updated, Version 1) XX DE Citrus tristeza virus partial CP gene for coat protein, isolate DE L-Clem1-Mor, clone 3 XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA Afechtal M.; RT ; RL Submitted (27-MAR-2013) to the INSDC. RL Plant protection, National Institute of Agricultural Research INRA, B.P. RL 257, 14 rue Abou Temmam, Kenitra, Morocco, 14000, MOROCCO. XX RN [2] RA Afechtal M., D'Onghia A.M., Cocuzza G., Djelouah K.; RT "Presence of CTV resistance-breaking strain in Morocco: a threat to the RT citrus industry in the country"; RL Unpublished. XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /isolate="L-Clem1-Mor" FT /mol_type="genomic RNA" FT /clone="3" FT /db_xref="taxon:12162" FT CDS <1. .>671 FT /codon_start=1 FT /transl_table=1 FT /gene="CP" FT /product="coat protein" FT /protein_id="CCW28902.1" FT /translation="MDDETKKLKNKNKETKEGDDVVAAESSFGSMNLHIDPTLIAMNDV FT RQLGTQQNAALNRDLFLTLKGKHPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLPDKLWTDVVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 199 A; 132 C; 166 G; 175 T; 0 other; hf947330 Length: 672 28-MAY-2013 Type: N Check: 8963 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaaaga 51 aggcgacgac gttgtcgccg ctgagtcttc tttcggttcc atgaacttac 101 acatcgatcc aactctgata gcgatgaatg acgtgcgtca gttgggtacc 151 caacagaacg ctgctttaaa cagagactta tttcttactt tgaaagggaa 201 gcatcctaac ttacctgaca aagataagga ctttcacata gctatgatgt 251 tgtatcgttt agcagttaaa agttcatcat tacaaagcga tgacgacact 301 acgggtataa cgtacactcg ggagggtgtt gaagtggatt tgcctgacaa 351 actttggact gacgtcgtgt ttaactccaa gggtattggt aaccgtacca 401 acgcccttcg agtttggggt agaactaacg atgcccttta cttagctttt 451 tgtagacaga atcgcaattt gagttatggc ggacgtccgt tagatgcagg 501 gattccggcc gggtatcatt acctgtgtgc agatttcctg accggagctg 551 gcttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaagaagc gaggagctga tgaagtcgta gttaccaatg tcaggcagct 651 tgggaaattc aacacacgtt ga