Sequence of DPV Citrus tristeza virus
Citrus tristeza virus partial CP gene for coat protein, isolate L-Clem4-Mor, clone 7
ACC No: HF947333
Dated: 2013-05-28 | Length: 672 | CRC: -376210477
ID HF947333; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC HF947333; XX DT 28-MAY-2013 (Rel. 116, Created) DT 28-MAY-2013 (Rel. 116, Last updated, Version 1) XX DE Citrus tristeza virus partial CP gene for coat protein, isolate DE L-Clem4-Mor, clone 7 XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA Afechtal M.; RT ; RL Submitted (27-MAR-2013) to the INSDC. RL Plant protection, National Institute of Agricultural Research INRA, B.P. RL 257, 14 rue Abou Temmam, Kenitra, Morocco, 14000, MOROCCO. XX RN [2] RA Afechtal M., D'Onghia A.M., Cocuzza G., Djelouah K.; RT "Presence of CTV resistance-breaking strain in Morocco: a threat to the RT citrus industry in the country"; RL Unpublished. XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /isolate="L-Clem4-Mor" FT /mol_type="genomic RNA" FT /clone="7" FT /db_xref="taxon:12162" FT CDS <1. .>671 FT /codon_start=1 FT /transl_table=1 FT /gene="CP" FT /product="coat protein" FT /protein_id="CCW28905.1" FT /translation="MDDETKKLKNKNKETKEGDDVVAAESSFGSVNLHIDPTLITMNDV FT RQLSTQQNAALNRDLFLALKGKYPNLPDKDKDFHIAMMLYHLAVKSSSLQSDDDATGIT FT YTREGVEVDLSDKLWTDIVYSSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 195 A; 122 C; 172 G; 183 T; 0 other; hf947333 Length: 672 28-MAY-2013 Type: N Check: 3771 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaaaga 51 aggcgacgat gttgttgctg ctgagtcttc tttcggttcc gtaaacttac 101 acatcgatcc gactctgata acgatgaacg atgtgcgtca gttgagtact 151 caacagaatg ctgctttgaa cagggactta tttcttgctc tgaaagggaa 201 gtatcctaac ttgcctgaca aagataagga ctttcacata gctatgatgt 251 tataccattt agcggttaag agttcatcat tgcaaagtga tgatgacgcc 301 acgggcataa cgtacactcg ggagggtgtt gaagtagatt tgtctgacaa 351 actttggacc gacatcgtgt atagttctaa gggtattggt aaccgaacta 401 acgcccttcg agtctggggt agaactaacg atgctcttta cttagccttt 451 tgtagacaga accgcaattt gagttatggc ggacgtccgc tagatgcagg 501 gattccggct gggtatcatt atttgtgtgc agatttcttg accggagctg 551 gcttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaaaaagc ggggggctga tgaggttgta gttactaatg tcaggcagct 651 tgggaaattc aacacacgtt ga