Sequence of DPV Citrus tristeza virus
Citrus tristeza virus partial CP gene for coat protein, isolate L-Clem5-Mor, clone 8
ACC No: HF947334
Dated: 2013-05-28 | Length: 672 | CRC: 1522261112
ID HF947334; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC HF947334; XX DT 28-MAY-2013 (Rel. 116, Created) DT 28-MAY-2013 (Rel. 116, Last updated, Version 1) XX DE Citrus tristeza virus partial CP gene for coat protein, isolate DE L-Clem5-Mor, clone 8 XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA Afechtal M.; RT ; RL Submitted (27-MAR-2013) to the INSDC. RL Plant protection, National Institute of Agricultural Research INRA, B.P. RL 257, 14 rue Abou Temmam, Kenitra, Morocco, 14000, MOROCCO. XX RN [2] RA Afechtal M., D'Onghia A.M., Cocuzza G., Djelouah K.; RT "Presence of CTV resistance-breaking strain in Morocco: a threat to the RT citrus industry in the country"; RL Unpublished. XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /isolate="L-Clem5-Mor" FT /mol_type="genomic RNA" FT /clone="8" FT /db_xref="taxon:12162" FT CDS <1. .>671 FT /codon_start=1 FT /transl_table=1 FT /gene="CP" FT /product="coat protein" FT /protein_id="CCW28906.1" FT /translation="MDDETKKLKNKNKETKEGDDVVAAESSFGSVNLHIDPTLITMNDV FT RQLSTQQNAALNRDLFLALKGKYPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLSDKLWTDIVYNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 197 A; 123 C; 170 G; 182 T; 0 other; hf947334 Length: 672 28-MAY-2013 Type: N Check: 3219 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaaaga 51 aggcgacgat gttgttgccg ctgagtcttc tttcggttcc gtaaacttac 101 acatcgatcc gactctgata acgatgaacg atgtgcgtca gttgagtact 151 caacagaatg ctgctttgaa cagggactta tttcttgctc tgaaagggaa 201 gtatcctaac ttgcctgaca aagataagga ctttcacata gctatgatgt 251 tataccgttt agcggttaag agttcatcat tgcaaagtga tgatgacacc 301 acgggcataa cgtacactcg ggagggtgtt gaagtagatt tgtctgacaa 351 actttggacc gacatcgtgt ataattctaa gggtattggt aaccgaacta 401 acgcccttcg agtctggggt agaactaacg atgctcttta cttagccttt 451 tgtagacaga accgcaattt gagttatggc ggacgtccgc tagatgcagg 501 gattccggct gggtatcatt atttgtgtgc agatttcttg accggagctg 551 gcttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaaaaagc gaggggctga tgaggttgta gttactaatg tcaggcagct 651 tgggaaattc aacacacgtt ga