Sequence of DPV Citrus tristeza virus
Citrus tristeza virus partial CP gene for coat protein, isolate B11-Bosnia
ACC No: HF947344
Dated: 2013-06-16 | Length: 672 | CRC: -2145195146
ID HF947344; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC HF947344; XX DT 16-JUN-2013 (Rel. 117, Created) DT 16-JUN-2013 (Rel. 117, Last updated, Version 1) XX DE Citrus tristeza virus partial CP gene for coat protein, isolate B11-Bosnia XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA Afechtal M.; RT ; RL Submitted (15-APR-2013) to the INSDC. RL Plant protection, National Institute of Agricultural Research INRA, B.P. RL 257, 14 rue Abou Temmam, Kenitra, Morocco, 14000, MOROCCO. XX RN [2] RA Delic D., Lolic B., Afechtal M., Djelouah K., Karacic A.; RT "First report of Citrus tristeza virus in Bosnia and Herzegovina"; RL Unpublished. XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /isolate="B11-Bosnia" FT /mol_type="genomic RNA" FT /country="Bosnia and Herzegovina" FT /db_xref="taxon:12162" FT CDS <1. .>671 FT /codon_start=1 FT /transl_table=1 FT /gene="CP" FT /product="coat protein" FT /protein_id="CCW28896.1" FT /translation="MDDETKKLKNKTKEIKEGDDVVAAESSFSSINLHIDPTLIAMNDV FT RQLGTQQNAALNRDLFLTLKGKHPALPDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVDVDLPDKLWTDVVFNSKGIGNRANALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 195 A; 128 C; 167 G; 182 T; 0 other; hf947344 Length: 672 16-JUN-2013 Type: N Check: 2532 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaccaagg aaataaaaga 51 aggcgacgac gttgttgctg ctgagtcttc tttcagttcc ataaacttac 101 acatcgatcc aactttgata gcgatgaatg atgtgcgtca gttgggtacc 151 caacagaacg ctgctttaaa cagagactta tttcttactt tgaaagggaa 201 gcatcctgcc ttacctgata aagataagga ctttcatata gctatgatgt 251 tgtatcgttt agcagttaag agttcatcat tacaaagcga tgacgacact 301 acgggtataa cgtacactcg ggagggtgtt gatgtggatt tgcctgacaa 351 actttggacc gacgtcgtgt ttaactccaa gggtattggc aaccgtgcta 401 acgcccttcg agtttggggt agaactaacg atgcccttta cttagctttt 451 tgtagacaga atcgcaattt gagttatggc ggacgtccgc tagatgcagg 501 gattccggcc gggtatcatt acctgtgtgc agatttcttg accggagctg 551 gcttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaagaagc gaggggctga tgaagtcgta gttaccaatg tcaggcagct 651 tgggaaattc aacacacgtt ga