Sequence of DPV Citrus tristeza virus
Citrus tristeza virus partial CP gene for coat protein, isolate B13-Bosnia
ACC No: HF947345
Dated: 2013-06-16 | Length: 672 | CRC: 1511246949
ID HF947345; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC HF947345; XX DT 16-JUN-2013 (Rel. 117, Created) DT 16-JUN-2013 (Rel. 117, Last updated, Version 1) XX DE Citrus tristeza virus partial CP gene for coat protein, isolate B13-Bosnia XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA Afechtal M.; RT ; RL Submitted (15-APR-2013) to the INSDC. RL Plant protection, National Institute of Agricultural Research INRA, B.P. RL 257, 14 rue Abou Temmam, Kenitra, Morocco, 14000, MOROCCO. XX RN [2] RA Delic D., Lolic B., Afechtal M., Djelouah K., Karacic A.; RT "First report of Citrus tristeza virus in Bosnia and Herzegovina"; RL Unpublished. XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /isolate="B13-Bosnia" FT /mol_type="genomic RNA" FT /country="Bosnia and Herzegovina" FT /db_xref="taxon:12162" FT CDS <1. .>671 FT /codon_start=1 FT /transl_table=1 FT /gene="CP" FT /product="coat protein" FT /protein_id="CCW28897.1" FT /translation="MDDETKKLKNKNKEIKEGDDVVAAESSFSSINLHIDPTLIAMNDV FT RQLGTQQNAALNRDLFLTLKGKHPALPDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVDVDLPDKLWTDVVFNSKGIGNRANALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 196 A; 128 C; 167 G; 181 T; 0 other; hf947345 Length: 672 16-JUN-2013 Type: N Check: 2258 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaataaaaga 51 aggcgacgac gttgttgccg ctgagtcttc tttcagttcc ataaacttac 101 acatcgatcc aactttgata gcgatgaatg atgtgcgtca gttgggtacc 151 caacagaacg ctgctttaaa cagagactta tttcttactt tgaaagggaa 201 gcatcctgcc ttacctgata aagataagga ctttcatata gctatgatgt 251 tgtatcgttt agcagttaag agttcatcat tacaaagcga tgacgacact 301 acgggtataa cgtacactcg ggagggtgtt gatgtggatt tgcctgacaa 351 actttggacc gacgtcgtgt ttaactccaa gggtattggc aaccgtgcta 401 acgcccttcg agtttggggt agaactaacg atgcccttta cttagctttt 451 tgtagacaga atcgcaattt gagttatggc ggacgtccgc tagatgcagg 501 gattccggcc gggtatcatt acctgtgtgc agatttcttg accggagctg 551 gcttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaagaagc gaggggctga tgaagtcgta gttaccaatg tcaggcagct 651 tgggaaattc aacacacgtt ga