Sequence of DPV Citrus tristeza virus

Citrus tristeza virus partial CP gene for coat protein, isolate C22-Bosnia

ACC No: HF947347

Dated: 2013-06-16 | Length: 672 | CRC: 219436149

                
ID   HF947347; SV 1; linear; genomic RNA; STD; VRL; 672 BP.
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AC   HF947347;
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DT   16-JUN-2013 (Rel. 117, Created)
DT   16-JUN-2013 (Rel. 117, Last updated, Version 1)
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DE   Citrus tristeza virus partial CP gene for coat protein, isolate C22-Bosnia
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KW   .
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OS   Citrus tristeza virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Closterovirus.
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RN   [1]
RP   1-672
RA   Afechtal M.;
RT   ;
RL   Submitted (15-APR-2013) to the INSDC.
RL   Plant protection, National Institute of Agricultural Research INRA, B.P.
RL   257, 14 rue Abou Temmam, Kenitra, Morocco, 14000, MOROCCO.
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RN   [2]
RA   Delic D., Lolic B., Afechtal M., Djelouah K., Karacic A.;
RT   "First report of Citrus tristeza virus in Bosnia and Herzegovina";
RL   Unpublished.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .672
FT                   /organism="Citrus tristeza virus"
FT                   /isolate="C22-Bosnia"
FT                   /mol_type="genomic RNA"
FT                   /country="Bosnia and Herzegovina"
FT                   /db_xref="taxon:12162"
FT   CDS             <1. .>671
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="CCW28899.1"
FT                   /translation="MDDETKKLKNKNKETKEGDDVVAAESSFGSLNLHIDPTLIAMNDV
FT                   RQLGTQQNAALNRDLFLTLKGKHPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGIT
FT                   YTREGVEVDLPDKLWTDVVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP
FT                   LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFNT
FT                   R"
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SQ   Sequence 672 BP; 198 A; 129 C; 165 G; 180 T; 0 other;

hf947347 Length: 672  16-JUN-2013  Type: N  Check: 250  ..

       1  atggacgacg aaacaaagaa attgaagaac aaaaataagg aaacgaaaga
      51  aggcgacgac gttgttgccg ctgagtcttc tttcggttcc ttaaacttac
     101  acatcgatcc aactctgata gcgatgaatg acgtgcgtca gttgggtacc
     151  caacagaacg ctgctttaaa cagagactta tttcttactt tgaaagggaa
     201  gcatcctaac ttacctgaca aagataagga ctttcacata gctatgatgt
     251  tgtatcgttt agcagttaaa agttcatcat tacaaagtga tgacgacact
     301  acgggtataa cgtacactcg ggagggtgtt gaagtggatt tgcctgacaa
     351  actttggact gacgtcgtgt ttaactccaa gggtatcggc aaccgtacta
     401  acgcccttcg tgtttggggt agaactaacg atgcccttta cttagctttt
     451  tgtagacaga atcgcaattt gagttatggc ggacgtccgt tagatgcagg
     501  gattccggcc gggtatcatt acctgtgtgc agatttcttg accggagctg
     551  gcttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaattg
     601  ttgaagaagc gaggagctga tgaagtcgta gttaccaatg tcaggcagct
     651  tgggaaattc aacacacgtt ga