Sequence of DPV Rice ragged stunt virus
Rice ragged stunt virus isolate CT segment 9, complete sequence.
ACC No: HM125547
Dated: 2011-05-01 | Length: 1132 | CRC: 723099311
ID HM125547; SV 1; linear; genomic RNA; STD; VRL; 1132 BP. XX AC HM125547; XX DT 01-MAY-2011 (Rel. 108, Created) DT 01-MAY-2011 (Rel. 108, Last updated, Version 1) XX DE Rice ragged stunt virus isolate CT segment 9, complete sequence. XX KW . XX OS Rice ragged stunt virus OC Viruses; dsRNA viruses; Reoviridae; Spinareovirinae; Oryzavirus. XX RN [1] RP 1-1132 RA Chen Q., Wu M.A., Wu Z.J., Xie L.H.; RT "Phylogenetic evidence for origin and evolution of rice rigged stunt RT virus"; RL Unpublished. XX RN [2] RP 1-1132 RA Chen Q., Wu M.A., Wu Z.J., Xie L.H.; RT ; RL Submitted (15-APR-2010) to the EMBL/GenBank/DDBJ databases. RL Institute of Plant Virology, Fujian Agricultural and Forestry University, RL Fuzhou, Fujian 350002, P.R. China XX CC GenBank Accession Numbers HM125539-HM125548 represent sequences CC from the 10 segments of Rice ragged stunt virus. XX FH Key Location/Qualifiers FH FT source 1. .1132 FT /organism="Rice ragged stunt virus" FT /segment="9" FT /host="rice" FT /isolate="CT" FT /mol_type="genomic RNA" FT /country="China:Changting, Fujian province" FT /collection_date="2007" FT /db_xref="taxon:42475" FT CDS 14. .1030 FT /codon_start=1 FT /product="spike protein" FT /note="RRSVs9gp1; P9" FT /protein_id="AEC32889.1" FT /translation="MKTAFARDPFTAPATGTYGTIYASRSLPRLSISKFLEDANPEIYE FT LSRYEALGTNRPSSGKRAMQPAVSKPALLETVFTLDIWYRRTNNQNIGNLRDSVSRFLS FT DDRVREAVMVRLDLDIVVQLKEYWLIVKDKEAQTFADRLAFDSHLFVNRGENANYDLVT FT QTFIPSDAFLKDNFKTEALKKLLLSVQNHTGLDAGLQGDSSKATYNIGLGQYLEDEALL FT YRQGVALQQMAFAELELARGAEKEAFPSTFDLSNRPACNLILKRTCKWYQQTFKAEERK FT EFAKSLWVDDFAEANWNTGNLSFGFSTTLNVIERWRLTRFYVHMYSSVHIYSQKASG" XX SQ Sequence 1132 BP; 332 A; 237 C; 273 G; 290 T; 0 other; hm125547 Length: 1132 01-MAY-2011 Type: N Check: 5807 .. 1 gataaatctc gccatgaaga ctgcctttgc cagagatcct tttacagctc 51 ctgctacagg tacgtacgga actatatatg cctccagatc attaccccga 101 ctctctatct ctaagttctt ggaagatgca aatccagaaa tttatgaact 151 atcaagatat gaagcgctcg gaaccaacag acccagctca gggaagcgag 201 caatgcaacc agccgtcagt aaaccagctt tactggaaac cgtattcaca 251 ctcgatatat ggtacagaag gacgaacaac cagaacatcg gcaatttaag 301 agattcggta tctcgatttc tatctgatga tcgagtaaga gaagcggtga 351 tggtgcgact agatttagac attgttgtcc agctaaaaga atactggttg 401 atagttaaag acaaagaagc ccagactttc gcggaccgat tggcctttga 451 ctcgcatcta tttgtcaatc gcggcgaaaa cgcgaattac gatcttgtaa 501 ctcagacgtt cattccgagt gatgcttttc ttaaggataa ctttaagacg 551 gaagcactta agaagttgtt gctaagtgtc caaaaccata cgggactaga 601 cgctggattg caaggtgata gttcgaaagc gacttacaac attggcctag 651 gacaatatct cgaggatgag gccctcctgt accgtcaagg tgtggctcta 701 caacaaatgg cttttgcgga gttggaatta gctaggggag cagagaaaga 751 ggcgtttcca tcaaccttcg atctaagcaa tagaccggct tgcaacttga 801 tccttaagcg aacgtgtaag tggtatcaac aaacgtttaa ggctgaggag 851 agaaaggaat ttgcgaagag tttgtgggtg gatgactttg ccgaggctaa 901 ttggaacaca ggtaatttgt cttttggctt ttcaaccaca ttaaatgtaa 951 ttgagagatg gcgtttgacc agattttatg ttcatatgta ctcatctgtg 1001 catatatatt ctcagaaggc ctcggggtag gaaacgctgg ggatcaaggt 1051 gaattgaaat gaggacttct caccctcatg gacattcggc ctcttcacgg 1101 gtggcacccc gaaaactgcg agaccatggt gc