Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate ClarendonPark10 coat protein gene, complete cds.
ACC No: HM160505
Dated: 2012-05-28 | Length: 672 | CRC: -461625430
ID HM160505; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC HM160505; XX DT 28-MAY-2012 (Rel. 112, Created) DT 28-MAY-2012 (Rel. 112, Last updated, Version 1) XX DE Citrus tristeza virus isolate ClarendonPark10 coat protein gene, complete DE cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA Fisher L.C., Tennant P.F., McLaughlin W.A.; RT "Molecular characterization of the coat protein gene of some biological RT Jamaican Citrus tristeza virus isolates"; RL Unpublished. XX RN [2] RP 1-672 RA Fisher L.C., Tennant P.F., McLaughlin W.A.; RT ; RL Submitted (28-APR-2010) to the INSDC. RL Life Sciences, University of the West Indies, Mona Campus, 2 St. John's RL Close, Kingston 7 0, Jamaica XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /host="Citrus sp." FT /strain="severe" FT /isolate="ClarendonPark10" FT /mol_type="genomic RNA" FT /country="Jamaica" FT /collection_date="Mar-2007" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /codon_start=1 FT /product="coat protein" FT /protein_id="AEG77338.1" FT /translation="MDDETKKLKNKNKETKEGDNVVAAESSFGSLNLHIDPTLIAMNDV FT RQLGTQQNAALNRDLFLTLKGKHPDLPDKDKDFHLAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLPDKLWTDVVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFST FT R" XX SQ Sequence 672 BP; 198 A; 128 C; 165 G; 181 T; 0 other; hm160505 Length: 672 28-MAY-2012 Type: N Check: 1620 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaaaga 51 aggcgacaat gttgttgccg ctgagtcttc tttcggttcc ttaaacttac 101 acatcgatcc aactctgata gcgatgaatg acgtgcgtca gttgggtacc 151 caacagaacg ctgctttaaa cagagactta tttcttactt tgaaagggaa 201 gcatcctgac ttacctgaca aagataagga ctttcactta gctatgatgt 251 tgtatcgttt agcagttaag agttcatcat tacaaagcga tgacgatact 301 acgggtataa cgtacactcg ggagggtgtt gaagtagatt tgcctgacaa 351 actttggact gacgtcgtgt ttaactccaa gggtattggc aaccgtacta 401 acgcccttcg agtttggggt agaactaacg atgcccttta cttagctttt 451 tgtagacaaa atcgcaattt gagttatggc ggacgtccgc tagatgcagg 501 gattccggcc gggtatcatt acctgtgcgc agatttcttg accggagctg 551 gcttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaagaagc gaggagctga tgaagttgta gttaccaatg tcaggcagct 651 tgggaaattt agcacacgtt ga