Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate Arscott28 coat protein gene, complete cds.
ACC No: HM160513
Dated: 2012-05-28 | Length: 672 | CRC: -1973744190
ID HM160513; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC HM160513; XX DT 28-MAY-2012 (Rel. 112, Created) DT 28-MAY-2012 (Rel. 112, Last updated, Version 1) XX DE Citrus tristeza virus isolate Arscott28 coat protein gene, complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA Fisher L.C., Tennant P.F., McLaughlin W.A.; RT "Molecular characterization of the coat protein gene of some biological RT Jamaican Citrus tristeza virus isolates"; RL Unpublished. XX RN [2] RP 1-672 RA Fisher L.C., Tennant P.F., McLaughlin W.A.; RT ; RL Submitted (28-APR-2010) to the INSDC. RL Life Sciences, University of the West Indies, Mona Campus, 2 St. John's RL Close, Kingston 7 0, Jamaica XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /host="Citrus sp." FT /strain="severe" FT /isolate="Arscott28" FT /mol_type="genomic RNA" FT /country="Jamaica" FT /collection_date="Mar-2007" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /codon_start=1 FT /product="coat protein" FT /protein_id="AEG77346.1" FT /translation="MDDETKKLKNKNKETKEGDDVVAAESSFGSMNLHIDPTLIAMNDV FT RQLGTQQNAALNRDLFLTLKGKHPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLPDKLWNDVVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFST FT R" XX SQ Sequence 672 BP; 198 A; 127 C; 168 G; 179 T; 0 other; hm160513 Length: 672 28-MAY-2012 Type: N Check: 1445 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaaaga 51 aggcgacgac gttgttgccg ctgagtcttc tttcggttcc atgaacttac 101 acatcgatcc aactctgata gcgatgaatg acgtgcgtca gttgggtacc 151 caacagaacg ctgctttaaa cagagactta tttcttactt tgaaagggaa 201 gcatcctaac ttacctgaca aagataagga ctttcacata gctatgatgt 251 tgtatcgttt ggcagttaaa agttcatcat tacaaagcga tgacgacact 301 acgggtataa cgtacactcg ggagggtgtt gaagtggatt tgcctgacaa 351 actttggaat gacgtcgtgt ttaactccaa gggtattggt aaccgtacta 401 acgcccttcg agtttggggt agaactaacg atgcccttta cttagctttt 451 tgtagacaga atcgcaattt gagttatggc ggacgtccgt tagatgcagg 501 gattccggcc gggtatcatt acctgtgtgc agatttcttg accggagctg 551 gcttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaagaagc gaggagctga tgaagtcgta gttaccaatg tcaggcagct 651 tgggaaattt agcacacgtt ga