Sequence of DPV Melon chlorotic mosaic virus
Melon chlorotic mosaic virus isolate 2009-02-04-06 segment DNA-B, complete sequence.
ACC No: HM163577
Dated: 2010-08-11 | Length: 2607 | CRC: -1157803291
ID HM163577; SV 1; circular; genomic DNA; STD; VRL; 2607 BP.
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AC HM163577;
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DT 11-AUG-2010 (Rel. 105, Created)
DT 11-AUG-2010 (Rel. 105, Last updated, Version 1)
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DE Melon chlorotic mosaic virus isolate 2009-02-04-06 segment DNA-B, complete
DE sequence.
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KW .
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OS Melon chlorotic mosaic virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
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RN [1]
RC Publication Status: Available-Online prior to print
RP 1-2607
RX PUBMED; 20665058.
RA Romay G., Chirinos D., Geraud-Pouey F., Desbiez C.;
RT "Association of an atypical alphasatellite with a bipartite New World
RT begomovirus";
RL Arch. Virol. 0:0-0(2010).
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RN [2]
RP 1-2607
RA Romay G., Chirinos D., Geraud F., Desbiez C.;
RT ;
RL Submitted (29-APR-2010) to the EMBL/GenBank/DDBJ databases.
RL INRA, Domaine Saint Maurice, Montfavet 84140, France
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FH Key Location/Qualifiers
FH
FT source 1. .2607
FT /organism="Melon chlorotic mosaic virus"
FT /segment="DNA-B"
FT /host="watermelon"
FT /isolate="2009-02-04-06"
FT /mol_type="genomic DNA"
FT /country="Venezuela"
FT /collection_date="2009"
FT /db_xref="taxon:180399"
FT CDS 480. .1250
FT /codon_start=1
FT /product="BV1"
FT /note="nuclear shuttle protein"
FT /protein_id="ADK97755.1"
FT /translation="MYAIKNRRVWYSTHRRGYGQRSYNKRTYSGKRTDWKRRPIIPNNS
FT SDDTRIVSQRIHEDQFGPEFVIPHNTALSTFLTMPSIVKLQPNRSRDYIKLKRLRYKGT
FT LKIESVNADVNMGCVNSKIDGVFSLVIVIDRKPHLNGSGRLHTFDELFGARIHSHGNLS
FT IAPAMKERYYIRHVFKRVLSTEKDSLMTDIEGSALLSNRRFSCWSAFNDVDRESCNGVY
FT ANINKNAILIYYCWMSDAITKASTFVSFDLDYCG"
FT CDS complement(1337. .2218)
FT /codon_start=1
FT /product="BC2"
FT /note="cell to cell movement protein"
FT /protein_id="ADK97756.1"
FT /translation="MNSKLADPPNAFNYIESNRDEYQLSHDLTQIVLQFPSTTAQISAR
FT LTRSCMKIDHCVVEYRQQVPINASGTVIVEIHDKRMTDDQSLQASWTFPIRCNIDLHYF
FT SSSFFSLKDPIPWVLYYRVSDSNVHHGTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILS
FT KLFSAKDVDFSHVGYGKWERKLVRSMSTCRQGLLGPIDLRPGESWASRSTLGPAQSITE
FT SDDAEELHPYRELHRLNTPILDPGESASIVGMQRTQSNITLSLSQLNDIVRSTVQECIK
FT SNCTPNDPKSLN"
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SQ Sequence 2607 BP; 698 A; 525 C; 564 G; 820 T; 0 other;
hm163577 Length: 2607 11-AUG-2010 Type: N Check: 7544 ..
1 actggatggc cgcccgagtt tggtgcctct atccgtactg ccacgtgctt
51 ctccctcatt ggtgatatcc cctattggtg ccggcccatc tccttccgtt
101 ggtgcccagg cccaggccca aatctttatt taagtttatt gtcgtcctcg
151 tccactatcc tttactgtcg accaatgaga attcgttttc agagtcttcg
201 taatgacaac ggctgaccgg agatagtgga gatccttttc agccttatgt
251 cagtatcagc tttaaacttt aatttgaaat gcattggcgc atttgttagt
301 gcgatagtgg tcccatttat ccgacatatc ctcagtgcgt tctgcagaac
351 gatgacatgg accaataaaa tattagatat gaagcttatt agattgacct
401 attctttgcg gatcgttata taacgatgtt gttgtcgacg ttttccaaca
451 agactaatat tttaattcag taataaaata tgtacgcaat caagaacaga
501 agagtttggt attctacaca tcgtcggggt tatggacaac gtagttataa
551 taaacgtaca tattctggta agcgtaccga ttggaaacgc cgtccaatta
601 ttcctaataa ttccagcgat gatactagga ttgtttccca acgtatccac
651 gaagatcaat ttggaccgga gtttgtgatc ccacataata cggctctatc
701 aacctttttg acaatgccga gtattgtgaa acttcaacct aaccgttcta
751 gggattacat taaattaaaa cgactccgtt ataaaggtac gcttaagatc
801 gagagtgtta atgctgatgt gaacatgggt tgtgtcaatt ctaagattga
851 cggagtgttt tctctggtta ttgtgattga ccgtaaacct catcttaacg
901 gatctggacg tctacataca tttgatgaac tatttggcgc aaggattcac
951 agtcatggga atctatctat agcaccagca atgaaagagc gttattacat
1001 acgacacgtg ttcaagcgcg ttttgtccac tgagaaggac agtttgatga
1051 ctgatattga gggaagcgca ttattgtcta ataggcgctt tagttgttgg
1101 tctgcgttta atgatgtaga cagagaatca tgtaacggcg tttacgctaa
1151 cattaacaag aacgcaattt tgatttatta ctgttggatg tccgatgcta
1201 ttacgaaggc atccacattt gtatcgtttg atttggatta ttgtggctga
1251 ttaataaaat tgttattcaa taaccgttat catacaacat atattttgga
1301 atttacagtg ttgaacacta acatacatga ctcatcttaa tttaaagatt
1351 tggggtcatt tggggtacag ttactcttaa tacactcctg cacggttgat
1401 cttacgatat catttaactg tgatagtgac agcgttatgt tcgattgcgt
1451 cctttgcatt cctactattg atgccgactc tcccgggtct agaatgggcg
1501 tgtttaatct atgtagctct ctgtatggat gcaattcctc tgcatcatct
1551 gactccgtaa tggattgggc tgggcccaaa gtacttctac tagcccatga
1601 ttcaccgggc cttagatcga ttggtccaag aagaccttgc cgacatgttg
1651 acattgacct gacgagcttt cgttcccatt taccgtatcc gacgtggctg
1701 aaatcgacgt cttttgcgga aaacagtttc gataatatct ttaccgtcgg
1751 tgcccggaac ggtatatcaa cggaatgttt cgccgtcgat aatttcagtt
1801 ttcccttgaa cttggcgaaa tgcgtaccat gatgaacatt tgagtcgcta
1851 actctgtagt acagcaccca tggtattggg tctttcagcg aaaagaaaga
1901 agaagagaaa tagtggagat ctatgttgca tctgatcggg aacgtccagg
1951 acgcttgtaa ggattgatcg tccgtcatcc gcttgtcgtg gatttcgacg
2001 ataaccgttc ccgacgcgtt gatcggcact tgttgcctgt attctacgac
2051 gcagtggtcg attttcatac agcttctcgt cagtctagca cttatttgag
2101 ccgtggtcga cggaaattgc aacacgattt gggttaaatc atgcgataac
2151 tgatattcat cacgattcga ctcgatatag ttaaaggcat taggaggatc
2201 agccaattta gaattcatct atttaattag gccccgcagg ggtcgtcaca
2251 caggccgcgc agtcgggtcg tttaaattcc gacctctagt tgaacttcga
2301 ccagaagaag acgatagtcg tttacggcag agaaatttca gagatgatgg
2351 acaggaattt gatttctatt taatgatatc acatccgaga aatttcagag
2401 aagatgaaca ttaatttgat ttctacttac cgatatgacc tcatttatag
2451 tggaactagg gttttgtggc atattctgta aattggggtg aagacaccag
2501 cggagtcctc ttctaaaacc tattgtttat ggtgtcttgg tgtctcatat
2551 atactataag tctataaggt tcttaaaggg gtaaaatcgg ccatccacaa
2601 taatatt