Sequence of DPV Cotton leaf curl Burewala virus
Cotton leaf curl Burewala virus clone lko new segment A, complete sequence.
ACC No: HM461867
Dated: 2010-10-21 | Length: 2761 | CRC: -666366785
ID HM461867; SV 1; circular; genomic DNA; STD; VRL; 2761 BP. XX AC HM461867; XX DT 21-OCT-2010 (Rel. 106, Created) DT 21-OCT-2010 (Rel. 106, Last updated, Version 1) XX DE Cotton leaf curl Burewala virus clone lko new segment A, complete sequence. XX KW . XX OS Cotton leaf curl Burewala virus OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus; OC unclassified Begomovirus. XX RN [1] RP 1-2761 RA Kumar J., Kumar A.; RT "Molecular analysis of cotton leaf curl Burewala virus isolated from RT northern India"; RL Unpublished. XX RN [2] RP 1-2761 RA Kumar J., Kumar A.; RT ; RL Submitted (08-JUN-2010) to the EMBL/GenBank/DDBJ databases. RL Molecular Virology Lab, National Botanical Research Institute, Rana Pratap RL Marg, Lucknow, Uttar Pradesh 226001, India XX FH Key Location/Qualifiers FH FT source 1. .2761 FT /organism="Cotton leaf curl Burewala virus" FT /segment="A" FT /host="cotton" FT /isolate="Lucknow" FT /mol_type="genomic DNA" FT /country="India" FT /isolation_source="leaf tissue" FT /clone="lko new" FT /db_xref="taxon:620894" FT gene 131. .487 FT /gene="AV2" FT CDS 131. .487 FT /codon_start=1 FT /gene="AV2" FT /product="movement/precoat protein" FT /protein_id="ADO41110.1" FT /translation="MWDPLLNEFPDTVHGFRCMLAVKYLQLVEKTYSPDTLGYDLIRDL FT ILVIRARNYVEATSRYNHFHARFEGTPPSQLRQPICEPCCCPHCPRHQSKSMGEQAHEQ FT KAQDILDVQKSRCS" FT gene 291. .1064 FT /gene="AV1" FT CDS 291. .1064 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /protein_id="ADO41111.1" FT /translation="MSKRPADIIISTPASKVRRRLNFDSPYVSRAAAPIVRVTKAKAWA FT NRPMNRKPRIYWMYRSPDVPRGCEGPCKVQSFEFYTSYQHNRYSNVCSDVTRGTGLTQY FT KLVRDFAVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNE FT PSTATVKNVHRDRYQVLRKWYATVTGGQYASKEQALVKKFIRVNNYVVYNQQEAGKYEN FT HSENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT gene complement(1061. .1465) FT /gene="AC3" FT CDS complement(1061. .1465) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /protein_id="ADO41112.1" FT /translation="MDSRTGEPITAAQAGNGAYIWEVPNPLYFKIISHVNRPFTTNMDI FT LTIRIQFNHNLRKALGIHKCFIAFRIWMTSHPPTGLFLRVFRTQVLKYLNNLGIVSINN FT VVRAVDHVLWNVLQHVVFIDQSSSIKFNIY" FT gene complement(1206. .1610) FT /gene="AC2" FT CDS complement(1206. .1610) FT /codon_start=1 FT /gene="AC2" FT /product="transcription activator protein" FT /protein_id="ADO41113.1" FT /translation="MQSSSLSKDHCTQLPIIVQHREAKRRNRRRRVDLECGCSYYLSIN FT CHNHGFTHRGTHHCSSSREWRIYLGSSKSPLFQDHQPRQPSIHDEYGYTHDQDPVQSQP FT EESVGDTQMFHSFPNLDDLTPSDWSFLKGL" FT gene complement(1507. .2598) FT /gene="AC1" FT CDS complement(1507. .2598) FT /codon_start=1 FT /gene="AC1" FT /product="replication-associated protein" FT /protein_id="ADO41114.1" FT /translation="MAPPKRFKVQTKNYFITYPQCSLTKEEALSQIQAINTPSNKKYIK FT LCRELHEDGSPHLHVLIQFEGKFVCTNNRFFDLVSPTRSVHFHPNIQGAKSSSDVKAYI FT DKDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIKELAPKDFVVQFH FT NLNANLDRIFQEPPAPYISPFSPSSFDQVPEELEVWAINNVVDAAARPLRPRSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMRAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLNEEKNTALKNWALKNAIFITLEGPL FT YSASNHSTAQGSEETQQEEESRS" FT gene complement(2244. .2684) FT /gene="AC4" FT CDS complement(2244. .2684) FT /codon_start=1 FT /gene="AC4" FT /product="regulatory protein" FT /protein_id="ADO41115.1" FT /translation="MPFGDTINCIQSPIPRVKAHQLSLIDQSQWLPPNVLKYKPKIISS FT LIHSAHSPKRKHSPKFKPSTHPRIKNTSNSAESYTKMGALISMCSSSSRANSSAQITDS FT STWYPQPGQYISIRTFRELNQAQMSRPTSTRTGTLSSGESFR" XX SQ Sequence 2761 BP; 720 A; 545 C; 647 G; 849 T; 0 other; hm461867 Length: 2761 21-OCT-2010 Type: N Check: 7337 .. 1 accggatggc cgcgcgattt ttttgtgggc cctaccatta actcttgtcg 51 gccaatcata tgacccgctc aaagcttaaa taattctccc gcttattata 101 agtacttcgt tgctaagtat gcgtttgaaa atgtgggatc cactgttaaa 151 tgagttcccc gacaccgttc acggttttag gtgtatgtta gcagttaaat 201 atttgcagtt agtagagaaa acttactctc ctgatacatt gggttacgat 251 ttgataaggg atttaatcct ggtaataagg gctaggaatt atgtcgaagc 301 gaccagcaga tataatcatt tccacgcccg cttcgaaggt acgccgccgt 351 ctcaacttcg acagcccata tgtgagccgt gctgctgccc ccattgtccg 401 cgtcaccaaa gcaaaagcat gggcgaacag gcccatgaac agaaagccca 451 ggatatattg gatgtacaga agtccagatg ttcctagagg atgtgaaggt 501 ccatgtaagg ttcagtcgtt tgagttctac acatcatatc agcataatag 551 gtatagtaat gtgtgtagtg atgttactcg tggtactggg ctgacccaat 601 acaagttggt aagagatttt gctgttaagt ctgtttatgt gttgggtaag 651 atctggatgg atgagaacat taagacgaag aatcacacga atagtgtgat 701 gtttttcttg gttagagatc gtagacctgt tgataaacct caagattttg 751 gagaggtatt taatatgttt gataatgagc ccagtacggc gactgtgaag 801 aatgttcatc gtgataggta tcaagttctg cgcaaatggt atgcaactgt 851 caccggtgga caatacgctt caaaggaaca agctctcgtg aagaaattta 901 ttagagttaa taattatgtt gtgtataacc agcaggaagc tggcaagtat 951 gagaatcatt ctgagaatgc tttaatgttg tatatggcgt gtactcacgc 1001 ctctaaccca gtgtatgcta ccttgaagat acggatctac ttctatgatt 1051 ccgtgacaaa ttaataaata ttgaatttta ttgaagatga ttggtctata 1101 aatacaacat gttgtaatac attccataat acatgatcaa ctgctctaac 1151 tacattatta atactgacaa ttcctaagtt atttaaatat ttaagcactt 1201 gagtcctaaa gacccttaag aaaagaccag tcggagggtg tgaggtcatc 1251 cagattcgga aagctatgaa acatttgtgt atccccaacg ctttcctcag 1301 gttgtgattg aactggatcc tgatcgtgag tatatccata ttcgtcgtga 1351 atggacggtt gacgtggctg atgatcttga aatagagggg atttggaact 1401 tcccagatat atgcgccatt ccctgcttga gctgcagtga tgggttcccc 1451 tgtgcgtgaa tccatggttg tggcagttga ttgacagata ataagaacac 1501 ccgcattcaa gatctactct cctcctcctg ttgcgtctct tcgcttccct 1551 gtgctgtact atgattggaa gctgagtaca gtggtccttc gagagtgatg 1601 aagattgcat tttttaaggc ccaattcttt aatgctgtgt ttttttcctc 1651 gttgaggaat tccttataac tgctgttcgg accaggattg cacaggaaga 1701 ttgtcggtat cccgccttta atttgaactg gctttccgta ttttgtgttg 1751 gactgccagt ctctttgggc ccgcatgaac tctttaaagt gtttgaggaa 1801 atgcgggtcg acgtcatcaa tgacgttgta ccaggcgtcg ttactgtata 1851 ctttgggact caggtccaga tgtccgcaca aatagttatg tggtcccaaa 1901 gatctagccc acatcgtctt ccccgttcga ctatctccct caattactat 1951 actccgaggt ctaaggggcc gcgcagcggc atcgacaacg ttattgatgg 2001 cccaaacttc aagttcttct ggaacttgat cgaaagaaga aggagaaaag 2051 ggagaaatat agggagccgg tggctcctga aagattctgt ctagatttgc 2101 atttaaatta tgaaattgta ctacaaaatc tttaggagct agttccttaa 2151 tgactctaag agcctctgac ttactgcctg cattaagtgc tgcggcgtaa 2201 gcgtcgttgg ctgtctgctg tcctcctctt gctgatcttc catctatctg 2251 aaactctccc cactcgagag tgtccccgtc cttgtcgatg taggccttga 2301 catctgagct tgatttagct ccctgaatgt tcggatggaa atgtactgac 2351 ctggttgggg ataccaggtc gaagaatctg ttatttgtgc agacgaattt 2401 gccctcgaac tggatgagca catggagatg agggctccca tcttcgtgta 2451 actctctgca gagtttgatg tattttttat tcgagggtgt gttgatggct 2501 tgaatttggg agagtgcttc ctctttggtg agtgagcact gtggataagt 2551 gatgaaataa tttttggttt gtactttaaa acgtttgggg ggagccattg 2601 actttggtca attagagaca actgatgggc ttttactctg ggaattggag 2651 actggataca atttatagtg tctccaaatg gcatattctg taaacaacta 2701 gaagttcgtt tgaaattcaa attccccttt gggctccaaa agcggccatc 2751 cgtataatat t