Sequence of DPV Great Island virus
Great Island virus isolate CanAr 42 segment 7, complete sequence.
ACC No: HM543471
Dated: 2010-11-19 | Length: 1181 | CRC: -521226591
ID HM543471; SV 1; linear; genomic RNA; STD; VRL; 1181 BP.
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AC HM543471;
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DT 13-SEP-2010 (Rel. 106, Created)
DT 19-NOV-2010 (Rel. 106, Last updated, Version 2)
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DE Great Island virus isolate CanAr 42 segment 7, complete sequence.
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KW .
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OS Great Island virus
OC Viruses; dsRNA viruses; Reoviridae; Sedoreovirinae; Orbivirus.
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RN [1]
RP 1-1181
RX DOI; 10.1099/vir.0.024760-0.
RX PUBMED; 20739272.
RA Belhouchet M., Mohd Jaafar F., Tesh R.B., Grimes J., Maan S.,
RA Mertens P.P.C., Attoui H.;
RT "Complete sequence of Great Island virus and comparison with the T2 and
RT outer-capsid proteins of Kemerovo, Lipovnik and Tribec viruses (genus
RT Orbivirus, family Reoviridae)";
RL J. Gen. Virol. 91(Pt 12):2985-2993(2010).
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RN [2]
RP 1-1181
RA Belhouchet M., Mohd Jaafar F., Mertens P.P.C., Attoui H.;
RT ;
RL Submitted (14-JUN-2010) to the EMBL/GenBank/DDBJ databases.
RL Vector-Borne Diseases, Institute for Animal Health, Ash Road, Woking,
RL Surrey GU24 0NF, United Kingdom
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FH Key Location/Qualifiers
FH
FT source 1. .1181
FT /organism="Great Island virus"
FT /segment="7"
FT /isolate="CanAr 42"
FT /mol_type="genomic RNA"
FT /country="Canada"
FT /db_xref="taxon:204269"
FT CDS 18. .1091
FT /codon_start=1
FT /product="VP7"
FT /db_xref="GOA:E1AA95"
FT /db_xref="InterPro:IPR001803"
FT /db_xref="InterPro:IPR008935"
FT /db_xref="InterPro:IPR023176"
FT /db_xref="InterPro:IPR023178"
FT /db_xref="UniProtKB/TrEMBL:E1AA95"
FT /protein_id="ADM88598.1"
FT /translation="MDAYTARALSVLEGLAISGDPRSHRDPTTEATMSIFAMRFNSTTS
FT RPVIGTPTTREARRNNFYAAVDVAFATLNITSTFVMPGYIQNPQTLAILARDEIPYTPS
FT TFRRVQRIRICTNDHSNVREERHAYSHYEAVTSPGVVLPAPAGGGPRCYAISATTLQIH
FT IDAMQNEVLTPLIFPDQDDVIMAEFIWQRLANGIDNNAVINMGTNVELLRDNAAVEGGT
FT PFMATPRDHVVLASYEPVNLCTIHLTCTRYWVTAPPRVVYDSMEADILAVYTYRDEFWD
FT ALRSYVLQALGMPAHHYPTRPVTEFRQNLAIAILSRLFDVYCAMAPEINPPVAAQGVVG
FT GLAHRLQAALRAFRLGR"
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SQ Sequence 1181 BP; 250 A; 364 C; 331 G; 236 T; 0 other;
hm543471 Length: 1181 19-NOV-2010 Type: N Check: 7603 ..
1 gtaaaaactc tttcgccatg gacgcgtaca cagccagagc gctttcggtt
51 ttggagggcc tagccatttc aggagatcca cgctcacaca gagacccgac
101 tacggaggcg acgatgtcga tcttcgcgat gaggttcaac agtacgactt
151 cgcgcccagt gattggaacg ccgacgacga gggaggcaag acgcaataac
201 ttctacgccg ccgttgacgt ggcattcgct accctgaaca tcacatcgac
251 cttcgtgatg ccgggctaca tccagaatcc gcagacccta gcgatcctag
301 cgcgtgacga gatcccatac acgccgtcca cgttccggag ggtgcagcgg
351 attcgtatct gcacaaatga ccactcgaat gtgcgagagg agcggcatgc
401 atactctcac tacgaagcgg tcacctcccc aggcgttgtg ctcccggccc
451 ctgccggggg cggccctcgt tgctacgcaa tttcggcgac cacccttcag
501 atccatatcg acgcgatgca gaatgaagtc ctaaccccgc ttatcttccc
551 agaccaggat gatgtcatta tggcggaatt catctggcag cggcttgcca
601 atggcatcga taacaatgcg gtaataaaca tggggacgaa tgtggagctc
651 cttcgggaca acgcagctgt agagggaggg acaccattta tggcaacgcc
701 aagggatcac gttgtgcttg caagctacga gcccgtcaat ctctgcacta
751 tccaccttac gtgcacgcgc tactgggtca ccgcgccccc cagggtggta
801 tacgattcaa tggaggcgga cattctcgcc gtttatacct acagagacga
851 gttctgggac gcgctcagga gttacgtgct acaggcgcta ggcatgccgg
901 cgcaccacta tcccactcgc ccggttaccg agttccggca gaatctcgca
951 atcgcaatac tctcgcgcct cttcgacgtc tactgtgcca tggcgccaga
1001 gatcaacccc ccggtcgcgg cccaaggcgt tgtgggtggg ctcgctcata
1051 gactgcaagc cgctctgcgt gccttcaggt tggggcgcta gccgtcggct
1101 ccacccggca ggggcccccg cttgtcgtgc gttactcggg acccatgggc
1151 gtggtccgtg agtgcgatag agtcaagata c