Sequence of DPV Squash leaf curl China virus
Squash leaf curl China virus segment DNA-B, complete sequence.
ACC No: HM566113
Dated: 2010-08-03 | Length: 2716 | CRC: 640537364
ID HM566113; SV 1; circular; genomic DNA; STD; VRL; 2716 BP.
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AC HM566113;
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DT 03-AUG-2010 (Rel. 105, Created)
DT 03-AUG-2010 (Rel. 105, Last updated, Version 1)
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DE Squash leaf curl China virus segment DNA-B, complete sequence.
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KW .
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OS Squash leaf curl China virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-2716
RA Wu H.J., Gu Q.S., Peng B.;
RT ;
RL Submitted (20-JUN-2010) to the EMBL/GenBank/DDBJ databases.
RL Biotechnology Centre, ZhengZhou Fruit Institute, The Chinese Academy of
RL Agricultural Sciences, South of East Hanghai Road, Zhengzhou, Henan 450009,
RL China
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FH Key Location/Qualifiers
FH
FT source 1. .2716
FT /organism="Squash leaf curl China virus"
FT /segment="DNA-B"
FT /host="Cucumis melo"
FT /mol_type="genomic DNA"
FT /country="China"
FT /collection_date="25-Mar-2010"
FT /db_xref="taxon:223323"
FT gene 478. .1284
FT /gene="BV1"
FT CDS 478. .1284
FT /codon_start=1
FT /gene="BV1"
FT /product="BV1 protein"
FT /protein_id="ADK78880.1"
FT /translation="MAFTGSYTPGRRYSASTNRLFNASRKSKGWKSRKYHGLVRYRNFY
FT SASRTPTDLFDDPISRQYTRKEICETQQGSEYVLQNNRYMTSYVTYPAKTRTGTNNRVR
FT SYIKLTGLTMSGTFGIRCSDLMTDVDQPSGLYGVVSIVIVRDKSPKIYSTAQPLVPFVE
FT LFGSVNSCRGTLKVAERHRERFVVLNQTSILINTPHCNAMKKFSIRNCISRTYSTWATF
FT KDEEEDSATGLYSNTLRNAILIYYVWLSDVPSQLDMYSNVMLNYIG"
FT gene complement(1337. .2182)
FT /gene="BC1"
FT CDS complement(1337. .2182)
FT /codon_start=1
FT /gene="BC1"
FT /product="BC1 protein"
FT /protein_id="ADK78879.1"
FT /translation="MSIRNDNMGIGVGGYIESDRVEYALTNDAAEVTLTFPSMFEQKIS
FT QLRNRCMKIDHVLLEYRSQVPINAVGHVVIEIHDMRLTEGDTKQAEFTIPIKCNCNLHY
FT YSSSYFSVKDKNPWRVEYKVENTNVVNGVHFCKMLGKLKLSSAKHSTDVEFRAPRIEIQ
FT SKEFTVNDIDFWSVGSKPQTRRLVDGSRLMGHSSRSLRVPHLAIGPNESWASRSEIGLG
FT SVTSRPYKNLSGLDESAIDPGPSASQVGSITRDEITEIITKTVEQCMKSNVNAPLTKGV
FT "
XX
SQ Sequence 2716 BP; 751 A; 592 C; 538 G; 835 T; 0 other;
hm566113 Length: 2716 03-AUG-2010 Type: N Check: 7404 ..
1 accgaaaggc cgcgcttttt tttcctttaa atctggccgt ctattgtcta
51 taaatgcgca tcaaactagt gcgatgaaca acacgtgtcc tatgtgtcat
101 cctttactaa aggaaaggat tgtacgatac ccaaatttgc acatggtgga
151 ccccagtgcc tagacatgca ctatccagga agctgcctat gtggtcccca
201 gcagataagg ctgctggtca tattgcgttt aaagtgtggt cccaacgata
251 atacatcatg catcagtcac cgttgctgta tcatatctac ggtattttga
301 acgacttaga tcaaaatagg aatttcacct tcatctcacc gttcgattat
351 tttacatccc cgtaattcga taaaacatgt cgtactgtac gcgttccatt
401 caaacattca agtgaattat atcactatat aattcacgat cttgcataat
451 cgttgccacg cgtaattatc cattcgaatg gcttttaccg gatcatatac
501 tccgggaaga cgatattcag catcaacaaa cagactattc aacgcaagca
551 ggaaatcgaa aggttggaag tctcggaaat accatggatt ggtgcgttat
601 cggaattttt attccgcatc taggacccca actgacctgt ttgatgatcc
651 tatttccaga caatacacgc gtaaggaaat ttgtgaaacg caacagggat
701 ctgaatatgt tctccagaac aaccgctaca tgacttcata tgtcacgtat
751 cctgctaaaa ctcgaacggg aacgaataac agagttcgtt catatatcaa
801 gctcacaggt cttaccatgt ctggaacatt tggcattcga tgctctgatt
851 tgatgaccga tgtcgatcaa cccagtggac tttatggtgt cgtgtctatt
901 gttattgtcc gggataaatc accgaagatt tattcgactg cacaaccact
951 cgtgccattt gttgaattat ttggttcggt taattcctgt cgtggtaccc
1001 tgaaggtggc agaacgccac cgggaaaggt ttgtggtgct caatcaaacg
1051 tccatactga taaacacgcc tcattgcaac gcaatgaaga aattctcaat
1101 tcgtaactgc atctcacgca cttactccac ctgggctacg ttcaaggacg
1151 aagaagagga tagtgccacc ggtttgtact caaatacgct tcgaaatgct
1201 attcttatat attatgtgtg gttaagcgat gtaccatctc aactagacat
1251 gtacagcaat gtaatgctaa attacattgg ttaatccact catgacactg
1301 aaaagaactt ccattaataa atttgcaata aatttatcac acgcctttag
1351 ttaatggagc gtttacattt gatttcatac attgttctac cgtcttagtt
1401 attatttcag ttatctcgtc cctcgtaatg cttcccactt gtgatgccga
1451 tggaccagga tctattgcgg attcgtctaa tccgctgagg tttttatacg
1501 gtctgctggt gacagaaccc agcccaattt ccgatctact tgcccatgat
1551 tcgttcggac caatcgcaag atgtgggacg cgtaacgatc ttgaactgtg
1601 acccatgagt cttgatccat cgacgagccg tcttgtttgt ggtttcgagc
1651 caaccgacca gaaatctatg tcgttaacag tgaattcttt gctttggatt
1701 tctattcttg gtgctcggaa ttcgacgtca gtcgaatgtt tggccgagga
1751 tagttttaat ttaccgagca ttttacagaa atgaactcca ttcactacgt
1801 tcgtgttctc cactttgtat tcaactctcc aaggattttt atccttaacg
1851 gagaagtatg aggatgagta gtagtgcaga ttgcagttgc attttatcgg
1901 aattgtgaac tctgcttgtt tcgtgtctcc ctccgtcaat cgcatgtcgt
1951 gaatctcaat gaccacatgc ccaactgcat taattggtac ttggctgcga
2001 tattcaagaa gaacgtgatc aattttcatg catctgtttc tcaattgact
2051 gattttctgc tcgaacatgg aagggaacgt cagagtgacc tccgcagcgt
2101 cgtttgtgag agcgtactct acgcgatccg attctatgta tcctccaact
2151 ccaataccca tgttatcatt tcttattgac atattggccg cgcagcgtaa
2201 ttggctcttt aggtgaatga actatgaaac gtacactaaa ctaggttttg
2251 caaaagacca aaggaaagtg tgggagagga aatgcaggcc aactgcgttt
2301 ctaaagaaca tctaacaccg atttataacc tactatgtgt tatgtcactt
2351 gctactacca ataattcaaa atgcatccgt gaccgttgtt ctatcatatc
2401 taagatattt tgaacggctg agatcaaaat atgaatgtca atttagttgt
2451 accgttagta agcagcccaa ttagctaaaa ttgggatgtg gtatctatat
2501 tcttgggcca ctcaaaatag cccaattaag tatatatcca gtacgcccac
2551 ttaaagaacg atactgtttg aagtttattt acatggaaaa gttagagaga
2601 tgtcgcacct tctctctcta taccccaatt ggtgtccctt caaaactatg
2651 gtatattggg gtatggtgtc ttatatatac cttagagaaa ttttaggcgg
2701 cctttcgttt aatatt