Sequence of DPV Potato mop-top virus

Potato mop-top virus isolate North Dakota 1 triple gene block protein 1 (tgbp1) gene, partial cds; triple gene block protein 2 (tgbp2) gene, complete cds; and triple gene block protein 3 (tgbp3) gene, partial cds.

ACC No: HM776171

Dated: 2010-11-19 | Length: 417 | CRC: 427195001

                
ID   HM776171; SV 1; linear; genomic RNA; STD; VRL; 417 BP.
XX
AC   HM776171;
XX
DT   31-OCT-2010 (Rel. 106, Created)
DT   19-NOV-2010 (Rel. 106, Last updated, Version 2)
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DE   Potato mop-top virus isolate North Dakota 1 triple gene block protein 1
DE   (tgbp1) gene, partial cds; triple gene block protein 2 (tgbp2) gene,
DE   complete cds; and triple gene block protein 3 (tgbp3) gene, partial cds.
XX
KW   .
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OS   Potato mop-top virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Virgaviridae;
OC   Pomovirus.
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RN   [1]
RP   1-417
RA   David N., Mallik I., Crosslin J.M., Gudmestad N.C.;
RT   "First report of potato mop-top virus in North Dakota";
RL   Plant Dis. 94:1506-1506(2010).
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RN   [2]
RP   1-417
RA   David N., Mallik I., Crosslin J.M., Gudmestad N.C.;
RT   ;
RL   Submitted (18-JUL-2010) to the EMBL/GenBank/DDBJ databases.
RL   USDA-ARS, 24106 North Bunn Road, Prosser, WA 99350, USA
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FH   Key             Location/Qualifiers
FH
FT   source          1. .417
FT                   /organism="Potato mop-top virus"
FT                   /host="Solanum tuberosum (potato)"
FT                   /isolate="North Dakota 1"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /collection_date="Apr-2010"
FT                   /db_xref="taxon:37128"
FT   gene            <1. .36
FT                   /gene="tgbp1"
FT   CDS             <1. .36
FT                   /codon_start=1
FT                   /gene="tgbp1"
FT                   /product="triple gene block protein 1"
FT                   /note="involved in cell to cell movement"
FT                   /protein_id="ADO95204.1"
FT                   /translation="QQPQTDRYGPE"
FT   gene            23. .382
FT                   /gene="tgbp2"
FT   CDS             23. .382
FT                   /codon_start=1
FT                   /gene="tgbp2"
FT                   /product="triple gene block protein 2"
FT                   /note="involved in cell to cell movement"
FT                   /protein_id="ADO95205.1"
FT                   /translation="MVRNNEIGARPNKYWPVVAAVVAICLFGFLTVTNQKHATQSGDNI
FT                   HKFANGGQYRDGSKSIKYNCNNPRAYNGSSSNNTFSQLFLPVLLIGAALYAYLWFTRPD
FT                   CSVTCRGDCCRSYGS"
FT   gene            237. .>417
FT                   /gene="tgbp3"
FT   CDS             237. .>417
FT                   /codon_start=1
FT                   /gene="tgbp3"
FT                   /product="triple gene block protein 3"
FT                   /note="involved in cell to cell movement"
FT                   /protein_id="ADO95206.1"
FT                   /translation="MDPPVIIHSPNCSCQFCSSELPSTHTCGSQDRTVPSHVEATAAGH
FT                   MEAKNFSLQYVLLVA"
XX
SQ   Sequence 417 BP; 120 A; 84 C; 89 G; 124 T; 0 other;

hm776171 Length: 417  19-NOV-2010  Type: N  Check: 4865  ..

       1  cagcaaccac aaacagacag gtatggtccg gaataacgaa attggagcgc
      51  gaccaaataa atattggccg gtagttgcgg cagtagttgc aatttgtctt
     101  ttcggttttt taacagttac caatcaaaaa cacgctactc aatcaggtga
     151  taatatacat aaatttgcta acggtggcca gtacagggac ggttctaaga
     201  gtattaagta taattgtaat aatcccagag cttataatgg atcctccagt
     251  aataatacat tctcccaatt gttcttgcca gttttgctca tcggagctgc
     301  cctctacgca tacttgtggt tcacaagacc ggactgttcc gtcacatgta
     351  gaggcgactg ctgcaggtca tatggaagct aaaaattttt ctttgcagta
     401  tgttttgtta gtggctt