Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate AMC2 coat protein gene, complete cds.
ACC No: HQ012375
Dated: 2011-01-16 | Length: 672 | CRC: 1024139025
ID HQ012375; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC HQ012375; XX DT 16-JAN-2011 (Rel. 107, Created) DT 16-JAN-2011 (Rel. 107, Last updated, Version 1) XX DE Citrus tristeza virus isolate AMC2 coat protein gene, complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA Ayazpour K., Sijam K., Vadamalai G., Jaafar H.; RT ; RL Submitted (03-AUG-2010) to the EMBL/GenBank/DDBJ databases. RL Department of Plant Protection, Faculty of Agriculture, University Putra RL Malaysia, Upm Darul Ehsan, Serdang, Selangor 43400, Malaysia XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /host="Citrus x paradisi x Citrus trifoliata" FT /isolate="AMC2" FT /mol_type="genomic RNA" FT /country="Malaysia:Cameron Highland" FT /collection_date="Mar-2010" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /codon_start=1 FT /product="coat protein" FT /protein_id="ADV15566.1" FT /translation="MDDETKKLKNKNKETKEGDNVVAAESSFGSLNLHIDPTLITMNDV FT RQLSTQQNAALNRDLFLTLKGKYPNLSDKDKDFHLAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLSDKLWTDVVFNSKGIGNRTNALRVWGRSNDALYLAFSRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADDVVVTNVRQLGKFNT FT R" XX SQ Sequence 672 BP; 193 A; 127 C; 174 G; 178 T; 0 other; hq012375 Length: 672 16-JAN-2011 Type: N Check: 1780 .. 1 atggacgacg aaacaaagaa attgaagaac aagaacaagg aaacgaaaga 51 aggcgacaat gttgtcgcag cggagtcttc tttcggttcc ttaaacttac 101 acatcgatcc gactctgata acgatgaacg atgtgcgtca gttgagtacc 151 caacagaacg ccgctttgaa cagagatttg ttccttactt tgaaagggaa 201 gtatcctaat ttgtctgata aagataagga ctttcactta gctatgatgt 251 tgtatcgttt agcggttaag agttcatcat tgcaaagtga tgacgacacc 301 acgggcataa cgtacactcg ggagggcgtc gaagtggatt tgtctgacaa 351 actttggact gacgtcgtgt ttaattctaa gggtatcggt aaccgtacta 401 acgcccttcg agtctggggt agaagtaacg atgcccttta tttagcgttt 451 agtagacaga atcgcaattt gagttatggc ggacgtccgc tagacgcagg 501 gattccggcc gggtatcatt acctgtgtgc agatttcttg accggagctg 551 gcttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaagaagc gaggggctga tgatgtcgta gttaccaatg tcaggcagct 651 tgggaaattc aacacacgtt ga