Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate AMK19 coat protein gene, complete cds.
ACC No: HQ012390
Dated: 2011-01-16 | Length: 672 | CRC: -1335604156
ID HQ012390; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC HQ012390; XX DT 16-JAN-2011 (Rel. 107, Created) DT 16-JAN-2011 (Rel. 107, Last updated, Version 1) XX DE Citrus tristeza virus isolate AMK19 coat protein gene, complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA Ayazpour K., Sijam K., Vadamalai G., Jaafar H.; RT ; RL Submitted (03-AUG-2010) to the EMBL/GenBank/DDBJ databases. RL Department of Plant Protection, Faculty of Agriculture, University Putra RL Malaysia, Upm Darul Ehsan, Serdang, Selangor 43400, Malaysia XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /host="Citrus aurantifolia" FT /isolate="AMK19" FT /mol_type="genomic RNA" FT /country="Malaysia:Keluang" FT /collection_date="Jan-2010" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /codon_start=1 FT /product="coat protein" FT /protein_id="ADV15578.1" FT /translation="MGGATKKLKNKNKETKEGDDVVAAESSFGSVNLHIDPTLITMNDV FT RQLRAQQNAALNRDLFLTLKGKYPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLSDKLWTDVVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFTP FT R" XX SQ Sequence 672 BP; 190 A; 126 C; 178 G; 178 T; 0 other; hq012390 Length: 672 16-JAN-2011 Type: N Check: 1877 .. 1 atgggagggg caacaaagaa actgaagaac aaaaacaagg agacgaaaga 51 aggcgacgat gttgttgcag cagagtcttc attcggttcc gtgaacttac 101 acatcgatcc gactctgata acgatgaacg atgtgcgtca gttgagagcc 151 caacagaacg ccgctttgaa cagagatttg tttcttactc tgaaagggaa 201 gtatcctaac ttgcctgaca aggataagga cttccacata gctatgatgt 251 tatatcgttt agcggttaag agttcatcgt tgcaaagtga tgatgacacc 301 acgggcataa catacactcg ggagggtgtt gaagtggatt tgtctgacaa 351 actttggact gacgtcgtgt ttaactctaa gggtattggt aaccgtacta 401 atgcccttcg agtctggggt aggactaacg atgcccttta tttagctttc 451 tgtagacaga atcgcaattt gagttatggt ggacgtccgc tagatgcagg 501 gattccggct ggatatcatt acctatgtgc agatttcttg accggagctg 551 gcttgactga tttagaatgt gctgtgtaca tacaagctaa ggaacaattg 601 ttgaagaagc gaggggctga tgaagtcgta gttactaatg tcaggcagct 651 tgggaaattc accccacgtt ga