Sequence of DPV Citrus tristeza virus

Citrus tristeza virus isolate AMK35 coat protein gene, complete cds.

ACC No: HQ012395

Dated: 2011-01-16 | Length: 672 | CRC: 1873710626

                
ID   HQ012395; SV 1; linear; genomic RNA; STD; VRL; 672 BP.
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AC   HQ012395;
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DT   16-JAN-2011 (Rel. 107, Created)
DT   16-JAN-2011 (Rel. 107, Last updated, Version 1)
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DE   Citrus tristeza virus isolate AMK35 coat protein gene, complete cds.
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KW   .
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OS   Citrus tristeza virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Closterovirus.
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RN   [1]
RP   1-672
RA   Ayazpour K., Sijam K., Vadamalai G., Jaafar H.;
RT   ;
RL   Submitted (03-AUG-2010) to the EMBL/GenBank/DDBJ databases.
RL   Department of Plant Protection, Faculty of Agriculture, University Putra
RL   Malaysia, Upm Darul Ehsan, Serdang, Selangor 43400, Malaysia
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FH   Key             Location/Qualifiers
FH
FT   source          1. .672
FT                   /organism="Citrus tristeza virus"
FT                   /host="x Citrofortunella microcarpa"
FT                   /isolate="AMK35"
FT                   /mol_type="genomic RNA"
FT                   /country="Malaysia:Keluang"
FT                   /collection_date="Jan-2010"
FT                   /db_xref="taxon:12162"
FT   CDS             1. .672
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /protein_id="ADV15580.1"
FT                   /translation="MDGGTKKLKNKNKETKEGDDVVAAESSFGSVNLHIDPTLIAMNDV
FT                   RQLGTQQNAALNRDLFLTLKGKYPNLPDKDKDFHLAMMLYRLAVKSSSLQSDDDTTGIT
FT                   YTREGVEVELSDKLWTDVVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP
FT                   LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFTP
FT                   R"
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SQ   Sequence 672 BP; 196 A; 126 C; 171 G; 179 T; 0 other;

hq012395 Length: 672  16-JAN-2011  Type: N  Check: 2114  ..

       1  atggacggag gaacaaagaa attgaagaac aaaaacaagg aaacaaaaga
      51  aggtgacgat gttgttgcag ctgagtcttc tttcggttcc gtaaacttac
     101  acatcgatcc gactctgata gcgatgaacg atgtgcgtca gttgggtact
     151  caacagaatg ctgctttgaa cagagatttg tttcttacct tgaaagggaa
     201  gtatcctaac ttacccgaca aagataaaga ctttcactta gctatgatgt
     251  tatatcgttt agcagttaag agttcatcat tacaaagcga cgatgacacc
     301  acgggcataa catacactcg ggaaggtgtt gaagtggaat tgtctgacaa
     351  actttggact gacgtcgtgt ttaactctaa gggtattgga aaccgtacta
     401  acgcccttcg agtctggggt agaactaacg atgcccttta tttggctttt
     451  tgtagacaga accgcaattt gagttatggt ggacgtccgt tagatgcagg
     501  aattccggcc gggtatcact acctgtgtgc ggatttcttg accggagctg
     551  gcttgactga tttagaatgt gcggtgtaca tacaagctaa agagcaattg
     601  ttaaagaagc gaggggctga tgaggtcgta gtcactaatg tcaggcagct
     651  tgggaaattc accccacgtt ga