Sequence of DPV Citrus tristeza virus

Citrus tristeza virus isolate AMT27 coat protein gene, complete cds.

ACC No: HQ012419

Dated: 2011-01-16 | Length: 672 | CRC: 360467392

                
ID   HQ012419; SV 1; linear; genomic RNA; STD; VRL; 672 BP.
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AC   HQ012419;
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DT   16-JAN-2011 (Rel. 107, Created)
DT   16-JAN-2011 (Rel. 107, Last updated, Version 1)
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DE   Citrus tristeza virus isolate AMT27 coat protein gene, complete cds.
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KW   .
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OS   Citrus tristeza virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Closterovirus.
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RN   [1]
RP   1-672
RA   Ayazpour K., Sijam K., Vadamalai G., Jaafar H.;
RT   ;
RL   Submitted (03-AUG-2010) to the EMBL/GenBank/DDBJ databases.
RL   Department of Plant Protection, Faculty of Agriculture, University Putra
RL   Malaysia, Upm Darul Ehsan, Serdang, Selangor 43400, Malaysia
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FH   Key             Location/Qualifiers
FH
FT   source          1. .672
FT                   /organism="Citrus tristeza virus"
FT                   /host="Citrus aurantifolia"
FT                   /isolate="AMT27"
FT                   /mol_type="genomic RNA"
FT                   /country="Malaysia:Tanjung Karang"
FT                   /collection_date="Feb-2010"
FT                   /db_xref="taxon:12162"
FT   CDS             1. .672
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /protein_id="ADV15603.1"
FT                   /translation="MDGRTKKLKNKNKESKEGDDVVAAESSFGSLNLHIDPTLIAMNDV
FT                   RQLGTQQNAALNRDLFLTLKGKYPNLPDKDKDFHLAMMLYRLAVKSSSLQSDDDTTGIT
FT                   YTRDGVEVDLSDKLWTDVVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP
FT                   LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFTP
FT                   R"
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SQ   Sequence 672 BP; 190 A; 127 C; 171 G; 184 T; 0 other;

hq012419 Length: 672  16-JAN-2011  Type: N  Check: 6609  ..

       1  atggacggac gaacaaagaa attgaagaac aaaaacaagg aatcgaaaga
      51  aggcgacgat gttgttgcag cggagtcttc tttcggttcc ttaaatttac
     101  acatcgatcc gactctgata gcgatgaacg atgtgcgtca gttgggtacc
     151  caacagaatg ctgctttgaa cagagatttg tttcttacct tgaaagggaa
     201  gtatcctaac ttacctgaca aagataaaga ctttcactta gccatgatgt
     251  tgtatcgttt agcggttaag agttcatcat tacaaagcga cgatgacacc
     301  acgggtataa cgtacactcg ggatggtgtt gaagtggatt tgtctgacaa
     351  actttggact gacgtcgtgt ttaactctaa gggtattggt aaccgtacta
     401  acgcccttcg agtctggggt agaactaacg atgcccttta tttggctttt
     451  tgtagacaaa accgcaattt gagttatggt ggacgtccgt tagatgcggg
     501  aattccagcc gggtatcact acctgtgtgc agatttcttg accggagctg
     551  gcttgactga tttagaatgt gcagtgtaca tacaagctaa agagcaatta
     601  ttgaagaagc gaggggctga tgaggtcgta gttactaatg tcaggcagct
     651  tgggaaattc accccccgtt ga