Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate AMT31 coat protein gene, complete cds.
ACC No: HQ012421
Dated: 2011-01-16 | Length: 672 | CRC: 870059239
ID HQ012421; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC HQ012421; XX DT 16-JAN-2011 (Rel. 107, Created) DT 16-JAN-2011 (Rel. 107, Last updated, Version 1) XX DE Citrus tristeza virus isolate AMT31 coat protein gene, complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA Ayazpour K., Sijam K., Vadamalai G., Jaafar H.; RT ; RL Submitted (03-AUG-2010) to the EMBL/GenBank/DDBJ databases. RL Department of Plant Protection, Faculty of Agriculture, University Putra RL Malaysia, Upm Darul Ehsan, Serdang, Selangor 43400, Malaysia XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /host="Citrus hystrix" FT /isolate="AMT31" FT /mol_type="genomic RNA" FT /country="Malaysia:Tanjung Karang" FT /collection_date="Feb-2010" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /codon_start=1 FT /product="coat protein" FT /protein_id="ADV15605.1" FT /translation="MDDETKKLKNKNKETKERDDVVAAESSFSSVNLHIDPTLITMNDV FT RQLSTQQNATLNRDLFLTLKGKYPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDTTGIT FT YTREGVEVDLSDKLWTDVVFNSRGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFTT FT R" XX SQ Sequence 672 BP; 197 A; 126 C; 166 G; 183 T; 0 other; hq012421 Length: 672 16-JAN-2011 Type: N Check: 1783 .. 1 atggacgacg aaacaaagaa attaaagaac aaaaacaagg aaacgaaaga 51 acgcgacgat gttgttgctg ccgagtcttc tttcagttcc gtaaacttac 101 acatcgatcc gactttgata acgatgaacg atgtgcgtca gttgagtacc 151 caacagaacg ctactttgaa cagagactta ttccttacct tgaaagggaa 201 gtatcccaac ttacctgata aagataagga ctttcacata gctatgatgt 251 tgtatcgttt agcggttaag agttcatcat tacaaagcga tgacgacacc 301 acgggtataa cgtacactcg ggagggtgtt gaagtggatt tgtctgataa 351 actttggact gacgtcgtgt ttaactctag gggtattggt aaccgtacta 401 acgcccttcg agtttggggt agaactaacg atgcccttta cttagctttt 451 tgcagacaga atcgcaatct gagttatggc ggacgtccgc tagatgcagg 501 gattccagcc gggtatcatt atttgtgtgc ggatttcttg actggagctg 551 gtttgactga tttagagtgt gctgtgtaca tacaagctaa agaacaatta 601 ttgaagaagc gaggggctga tgaagtcgta gttactaatg tcaggcagct 651 tgggaaattc accacacgtt ga