Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate AMT36 coat protein gene, complete cds.
ACC No: HQ012424
Dated: 2011-01-16 | Length: 672 | CRC: -1490819920
ID HQ012424; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC HQ012424; XX DT 16-JAN-2011 (Rel. 107, Created) DT 16-JAN-2011 (Rel. 107, Last updated, Version 1) XX DE Citrus tristeza virus isolate AMT36 coat protein gene, complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA Ayazpour K., Sijam K., Vadamalai G., Jaafar H.; RT ; RL Submitted (03-AUG-2010) to the EMBL/GenBank/DDBJ databases. RL Department of Plant Protection, Faculty of Agriculture, University Putra RL Malaysia, Upm Darul Ehsan, Serdang, Selangor 43400, Malaysia XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /host="Citrus aurantifolia" FT /isolate="AMT36" FT /mol_type="genomic RNA" FT /country="Malaysia:Tanjung Karang" FT /collection_date="Feb-2010" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /codon_start=1 FT /product="coat protein" FT /protein_id="ADV15607.1" FT /translation="MDDETKKLKNKNKETKEGDDVVAAESSFGSVNLHIDPTLITMNDV FT RQLGTQQNAALNRDLFLTLKGKYPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDATGIT FT YTRGGVEVDLSDKLWTDVVFNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLNLAECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFTQ FT R" XX SQ Sequence 672 BP; 194 A; 121 C; 172 G; 185 T; 0 other; hq012424 Length: 672 16-JAN-2011 Type: N Check: 2699 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaacaagg aaacgaaaga 51 aggtgatgat gttgttgctg ccgagtcttc tttcggttcc gtaaacttac 101 acatcgatcc gactttgata acgatgaacg atgtgcgtca gttgggcacc 151 caacagaacg ctgctttgaa cagagacttg ttccttactt tgaaagggaa 201 gtatcctaac ttacctgata aagataagga ctttcacata gctatgatgt 251 tgtatcgttt agcagttaag agttcatcat tacaaagtga tgacgacgcc 301 acgggtataa cgtacactcg ggggggtgtt gaagtggatt tgtctgataa 351 actttggact gacgtcgtgt ttaactctaa gggtattggt aaccgtacta 401 acgcccttcg agtttggggt agaactaacg atgcccttta cttagctttt 451 tgcagacaga atcgtaattt gagttatggc ggacgtccgc tagacgcagg 501 gattccggcc gggtatcatt acttgtgtgc ggatttcttg actggagctg 551 gtttgaactt agcagaatgt gctgtgtaca tacaagctaa agaacaatta 601 ttgaagaagc gaggggctga tgaagtcgta gttactaatg tcaggcagct 651 tgggaaattc acacaacgtt ga