Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate AMT42 coat protein gene, complete cds.
ACC No: HQ012430
Dated: 2011-01-16 | Length: 672 | CRC: -1028143920
ID HQ012430; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC HQ012430; XX DT 16-JAN-2011 (Rel. 107, Created) DT 16-JAN-2011 (Rel. 107, Last updated, Version 1) XX DE Citrus tristeza virus isolate AMT42 coat protein gene, complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA Ayazpour K., Sijam K., Vadamalai G., Jaafar H.; RT ; RL Submitted (03-AUG-2010) to the EMBL/GenBank/DDBJ databases. RL Department of Plant Protection, Faculty of Agriculture, University Putra RL Malaysia, Upm Darul Ehsan, Serdang, Selangor 43400, Malaysia XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /host="Citrus aurantifolia" FT /isolate="AMT42" FT /mol_type="genomic RNA" FT /country="Malaysia:Tanjung Karang" FT /collection_date="Feb-2010" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /codon_start=1 FT /product="coat protein" FT /protein_id="ADV15613.1" FT /translation="MDDETKKLKNKKKEAKDGDDVVAAESSFSSVDLHIDPTLIVMNDV FT RRLSTQQNAALNRDLFLTLKGKYPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDGTGIT FT YTREGVEVDLSDKLWTDVVYNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFTP FT R" XX SQ Sequence 672 BP; 196 A; 119 C; 173 G; 184 T; 0 other; hq012430 Length: 672 16-JAN-2011 Type: N Check: 2814 .. 1 atggacgacg aaacaaagaa attgaagaac aaaaaaaagg aagcgaaaga 51 tggcgacgat gttgttgcgg ctgagtcttc tttcagttct gtagacttac 101 acatcgatcc gactctgata gtgatgaatg atgtgcgtcg gttaagcact 151 caacagaatg ctgctttgaa cagggactta tttcttactt tgaaagggaa 201 gtatcctaac ttaccagaca aagataagga ctttcatata gctatgatgt 251 tgtatcgttt agcggttaag agttcatcat tgcaaagcga tgacgacggt 301 acgggcataa cttacactag ggagggtgtt gaagtggatt tgtctgacaa 351 actttggact gatgttgtgt ataactctaa gggtattggt aaccgaacta 401 acgcccttcg agtctggggt agaactaacg atgcccttta cttagccttt 451 tgtagacaga atcgcaattt gagttacggc ggacgtccat tagacgcggg 501 aattccggcc gggtatcact atctgtgtgc agatttcttg accggagctg 551 gcttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaattg 601 ttgaaaaagc gaggggctga tgaggtcgta gttactaatg tcagacagct 651 tgggaaattc acaccacgtt ga