Sequence of DPV Citrus tristeza virus
Citrus tristeza virus isolate AMT43 coat protein gene, complete cds.
ACC No: HQ012431
Dated: 2011-01-16 | Length: 672 | CRC: -1039520285
ID HQ012431; SV 1; linear; genomic RNA; STD; VRL; 672 BP. XX AC HQ012431; XX DT 16-JAN-2011 (Rel. 107, Created) DT 16-JAN-2011 (Rel. 107, Last updated, Version 1) XX DE Citrus tristeza virus isolate AMT43 coat protein gene, complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-672 RA Ayazpour K., Sijam K., Vadamalai G., Jaafar H.; RT ; RL Submitted (03-AUG-2010) to the EMBL/GenBank/DDBJ databases. RL Department of Plant Protection, Faculty of Agriculture, University Putra RL Malaysia, Upm Darul Ehsan, Serdang, Selangor 43400, Malaysia XX FH Key Location/Qualifiers FH FT source 1. .672 FT /organism="Citrus tristeza virus" FT /host="Citrus aurantifolia" FT /isolate="AMT43" FT /mol_type="genomic RNA" FT /country="Malaysia:Tanjung Karang" FT /collection_date="Feb-2010" FT /db_xref="taxon:12162" FT CDS 1. .672 FT /codon_start=1 FT /product="coat protein" FT /protein_id="ADV15614.1" FT /translation="MDGETKKLKNKNKEAKDGDDVVAAESSFSSVDLHIDPTLIVMNDV FT RRLSTQQNAALNRDLFLTLKGKYPNLPDKDKDFHIAMMLYRLAVKSSSLQSDDDGTGIT FT YTREGVEVDLSDKLWTDVVYNSKGIGNRTNALRVWGRTNDALYLAFCRQNRNLSYGGRP FT LDAGIPAGYHYLCADFLTGAGLTDLECAVYIQAKEQLLKKRGADEVVVTNVRQLGKFTQ FT R" XX SQ Sequence 672 BP; 196 A; 121 C; 171 G; 184 T; 0 other; hq012431 Length: 672 16-JAN-2011 Type: N Check: 2803 .. 1 atggacggcg aaacaaagaa attgaagaac aaaaacaagg aagcgaaaga 51 tggcgacgat gttgttgctg ctgagtcttc tttcagttct gtagacttac 101 acatcgatcc gactttgata gtgatgaatg atgtgcgtcg gttaagcact 151 caacagaatg ctgctttgaa cagggactta ttccttactt tgaaagggaa 201 gtatcctaac ttaccagaca aagataagga ctttcacata gctatgatgt 251 tgtatcgttt agcggttaag agttcatcat tgcaaagcga tgacgacggc 301 acgggcataa cttacactag ggagggtgtt gaagtggatt tgtctgacaa 351 actttggact gatgttgtgt ataactctaa gggtattggt aaccgaacta 401 acgcccttcg agtctggggt agaactaacg atgcccttta cttagctttt 451 tgtagacaga atcgcaattt gagttacggc ggacgtccat tagacgcggg 501 aattccggcc gggtatcact atctgtgtgc agatttcttg accggagctg 551 gcttgactga tttagaatgt gctgtgtaca tacaagctaa agaacaatta 601 ttgaaaaagc gaggggctga tgaagtcgta gttactaatg tcagacagct 651 tgggaaattc acccaacgtt ga