Sequence of DPV Picobiliphyte nanovirus
Picobiliphyte sp. MS584-5 nanovirus, complete genome.
ACC No: HQ322117
Dated: 2011-06-22 | Length: 1832 | CRC: -212311455
ID HQ322117; SV 1; circular; genomic DNA; STD; VRL; 1832 BP. XX AC HQ322117; XX DT 22-JUN-2011 (Rel. 109, Created) DT 22-JUN-2011 (Rel. 109, Last updated, Version 1) XX DE Picobiliphyte sp. MS584-5 nanovirus, complete genome. XX KW . XX OS Picobiliphyte sp. MS584-5 nanovirus OC Viruses; ssDNA viruses; Nanoviridae; Nanovirus; unclassified Nanovirus. XX RN [1] RP 1-1832 RX PUBMED; 21551060. RA Yoon H.S., Price D.C., Stepanauskas R., Rajah V.D., Sieracki M.E., RA Wilson W.H., Yang E.C., Duffy S., Bhattacharya D.; RT "Single-cell genomics reveals organismal interactions in uncultivated RT marine protists"; RL Science 332(6030):714-717(2011). XX RN [2] RP 1-1832 RA Bhattacharya D., Yoon H.S., Price D.C., Stepanauskas R., Sieracki M.E., RA Wilson W.H., Yang E.C., Duffy S.; RT ; RL Submitted (28-SEP-2010) to the INSDC. RL Ecology, Evolution & Natural Resources, Rutgers University, 59 Dudley Road, RL New Brunswick, NJ 08901, USA XX FH Key Location/Qualifiers FH FT source 1. .1832 FT /organism="Picobiliphyte sp. MS584-5 nanovirus" FT /isolate="MS584-5" FT /mol_type="genomic DNA" FT /country="USA:off coast of Maine" FT /isolation_source="Picobiliphyte single cell from seawater" FT /db_xref="taxon:1046893" FT CDS 1020. .1832 FT /codon_start=1 FT /product="rep protein" FT /note="putative viral replication protein" FT /protein_id="AEI54346.1" FT /translation="MDDDRANRAEESGEGNTVLSPPKQGTQHTFWCFTLNNYTAEQIEH FT LELVFKHECKWYLFQEEVGEKCGTPHLQGQICLKTRMRMTELKRIDMKISWRATKSCTA FT SLEYCKKKETSTGKIYYHGMDVPDQVDLEEPYGWQLDILNVLKDKPHNRIIHWYWEPTG FT GKGKTSLSKYLVVKHDALMLTGKSNDMYHMISKFPKKRKLFIVDCPRSQQDYINYGAIE FT QIKNGLIFSGKYEGAQLVFNAPHVIVFANEPPDISKMSLDRWNVVRIA" XX SQ Sequence 1832 BP; 574 A; 316 C; 416 G; 526 T; 0 other; hq322117 Length: 1832 22-JUN-2011 Type: N Check: 9868 .. 1 aggcatttct attccaccta cgccgaataa gagttgtaac ccctaaaggg 51 gtaagaattc gagcgacgca cgatgaaaac ctcaacatca aagatgtctc 101 gctttccatt cggcggacgg tgggcagctg aagctgcgtt attaaaaata 151 gtgttattat tttgcgttat taaaaatagt gttattattt ttcttaatta 201 tccttgaaga atagctcagt attcagggat attttagcaa ggttgaatgt 251 tgtatcagca tcagggtgag cactgaaagc acaagcatga acacaatagt 301 tatacgattt accatcgttg gtggtgttat tctcatactg gtaggattta 351 atcctgccca ttggaatata cattatttta gttctaaatt caggtgttac 401 atctacagaa gatgaagcat tccatgtact gaattcattt ttgagattaa 451 tagagaacga ccgaaccaca gtgtgtgttc gtctttcaac tggggccatc 501 atactgttag aattgatgta tcgtaggaag tcgttagaga tattcacatt 551 agagtggtgt gtgcgtaaga cccacacctt tacccagata tttccgttta 601 acatatttat tccagcagca ggttggtcct gttgacattg aatatagagt 651 ttaatcccta caggttgaat agagttacct atacggttac cagaggttgc 701 tcctgaatca ataccttgac ttgttacgag taattgagat gctatcaact 751 tgggtacatt atgatagata actacggggt tgggggtaaa agattggatt 801 cgagacttgg tctcggtgtt agcgttgagg actcttttag caatgttata 851 catgctccga gaagacggtt tacgagtgta agtacgcttc ttatacggtt 901 tacgcaccgt gcgagtggat ttacgaacat agggcatttt attatagtat 951 tataaatagt ctttaaatag atatcatcct taaaggtatt taaggataac 1001 gctactaata tgcctaaaga tggacgacga tagagcaaat agagcagaag 1051 agagcgggga gggtaatact gtactctccc cgccaaaaca agggactcag 1101 cacacattct ggtgcttcac ccttaataac tacacagcag agcaaataga 1151 gcacttagag cttgtattca agcacgagtg caaatggtac ctcttccagg 1201 aggaagtagg tgagaagtgt ggtacaccac atttacaagg tcaaatatgt 1251 cttaagactc gtatgaggat gaccgagctg aagcgcatag acatgaagat 1301 aagctggaga gcgactaagt cgtgtacagc atctctggaa tattgtaaga 1351 agaaggagac cagtactggt aagatatatt atcatggaat ggatgtgcct 1401 gaccaggtag acctggagga accttatggc tggcaactgg acattctaaa 1451 tgtacttaag gataagccac ataatagaat tatacattgg tactgggaac 1501 ctaccggcgg taaggggaag acatcattaa gcaaatacct cgtggtgaaa 1551 cacgatgcct taatgttgac tggaaaaagt aatgatatgt accatatgat 1601 atcaaagttc ccaaagaaga gaaaattatt cattgtggac tgtcctcgtt 1651 cacagcaaga ttatatcaat tacggagcaa ttgaacaaat taaaaatggt 1701 ctgatattct caggtaagta tgaaggggct caattagtat ttaatgcacc 1751 tcatgttatc gtatttgcta atgaaccgcc agatatatct aagatgagtc 1801 ttgataggtg gaatgtggtc cgtatagcct aa