Sequence of DPV Citrus tristeza virus

Citrus tristeza virus clone 109 P20 gene, complete cds.

ACC No: HQ329215

Dated: 2010-12-29 | Length: 549 | CRC: -1571942245

                
ID   HQ329215; SV 1; linear; genomic RNA; STD; VRL; 549 BP.
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AC   HQ329215;
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DT   29-DEC-2010 (Rel. 107, Created)
DT   29-DEC-2010 (Rel. 107, Last updated, Version 1)
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DE   Citrus tristeza virus clone 109 P20 gene, complete cds.
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KW   .
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OS   Citrus tristeza virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Closterovirus.
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RN   [1]
RP   1-549
RA   Atta S.;
RT   "citrus tristeza virus from Pakistan";
RL   Unpublished.
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RN   [2]
RP   1-549
RA   Atta S.;
RT   ;
RL   Submitted (30-SEP-2010) to the EMBL/GenBank/DDBJ databases.
RL   Sequencing Lab, Shanghai Biosune Biotechnology Co. Ltd., Donglan Road No.
RL   248, 5th floor, Shanghai 201102, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .549
FT                   /organism="Citrus tristeza virus"
FT                   /host="Citrus sinensis"
FT                   /mol_type="genomic RNA"
FT                   /country="Pakistan"
FT                   /collection_date="2008"
FT                   /clone="109"
FT                   /db_xref="taxon:12162"
FT   CDS             1. .549
FT                   /codon_start=1
FT                   /product="P20"
FT                   /protein_id="ADU02545.1"
FT                   /translation="MRAYFSVNDYISLLAKVGAVVERLCDPSVTLTEVMDEINDFNSFL
FT                   ALVHSMKSDMNGDHQDGHHEMGEHKSRLLCNIEAKLRILLDIIRRRFTRDKLLCTSATD
FT                   VMGFFVMRYMSSSHTSFESVMRTELKLVVKAVLSDLSRTHKLDFSERAFAAYGILLQKG
FT                   TVATVCSQFDINLVSPSCV"
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SQ   Sequence 549 BP; 142 A; 114 C; 133 G; 160 T; 0 other;

hq329215 Length: 549  29-DEC-2010  Type: N  Check: 1948  ..

       1  atgcgagctt actttagtgt taacgattac ataagccttt tggctaaggt
      51  cggcgcagtt gtggaacgtt tatgcgatcc cagcgtaact ctcacggaag
     101  tgatggacga aattaatgac tttaactcgt ttctcgcttt ggtgcactct
     151  atgaagtcag acatgaacgg agatcatcag gatggtcacc atgagatggg
     201  tgaacacaag tctcggttgt tgtgcaatat agaggcgaaa ctgcgaatac
     251  ttctcgacat cataagacgt cggttcactc gcgacaagct gctctgtacc
     301  agcgcaacag atgtcatggg cttcttcgtc atgaggtaca tgagttctag
     351  tcacaccagt tttgaatccg taatgcgtac ggaattgaaa ttagtagtta
     401  aagcggtgct atcagatttg tcccgcacgc ataaactaga ttttagcgag
     451  cgagcctttg cagcttacgg tatcctttta caaaaaggta ctgtggcgac
     501  cgtctgtagt cagtttgaca ttaatttagt ttctccatct tgcgtgtag