Sequence of DPV Citrus tristeza virus
Citrus tristeza virus clone 115 P20 gene, complete cds.
ACC No: HQ329217
Dated: 2010-12-29 | Length: 549 | CRC: 854533002
ID HQ329217; SV 1; linear; genomic RNA; STD; VRL; 549 BP. XX AC HQ329217; XX DT 29-DEC-2010 (Rel. 107, Created) DT 29-DEC-2010 (Rel. 107, Last updated, Version 1) XX DE Citrus tristeza virus clone 115 P20 gene, complete cds. XX KW . XX OS Citrus tristeza virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Closterovirus. XX RN [1] RP 1-549 RA Atta S.; RT "citrus tristeza virus from Pakistan"; RL Unpublished. XX RN [2] RP 1-549 RA Atta S.; RT ; RL Submitted (30-SEP-2010) to the EMBL/GenBank/DDBJ databases. RL Sequencing Lab, Shanghai Biosune Biotechnology Co. Ltd., Donglan Road No. RL 248, 5th floor, Shanghai 201102, China XX FH Key Location/Qualifiers FH FT source 1. .549 FT /organism="Citrus tristeza virus" FT /host="Citrus reticulata" FT /mol_type="genomic RNA" FT /country="Pakistan" FT /collection_date="2008" FT /clone="115" FT /db_xref="taxon:12162" FT CDS 1. .549 FT /codon_start=1 FT /product="P20" FT /protein_id="ADU02547.1" FT /translation="MRAYFSVNDYISLLAKVGAVVERLCDPSVTLTEVMDEINDFNSFL FT ALVHSMKSDMNGDHQDGHHEMGEHKSRLLCNIEAKLRILLDIIRRRFTRDKLLCTSATD FT VMGFFVMRYMASSHISFESVMRTELKVVVKTVLSDLSRAHKLDFSERAFAAYGILLQKG FT TVATVCGQFDINLVSPSCV" XX SQ Sequence 549 BP; 139 A; 113 C; 136 G; 161 T; 0 other; hq329217 Length: 549 29-DEC-2010 Type: N Check: 3866 .. 1 atgcgagctt actttagtgt taacgattac ataagccttt tggctaaggt 51 cggcgcagtt gtggaacgtt tgtgcgatcc cagcgtgact ctcacggaag 101 tgatggacga aattaatgat tttaactcgt ttctcgcttt agtacactct 151 atgaagtcag acatgaacgg tgatcatcag gatggtcacc atgagatggg 201 tgagcacaag tctcgattgt tgtgcaatat agaggcgaag ctgcgaatac 251 ttctcgacat cataagacgt cggtttactc gcgacaagct gctctgtacc 301 agcgcaacag acgtcatggg cttcttcgtt atgaggtaca tggcttctag 351 tcacatcagt tttgaatccg taatgcgaac ggagttgaaa gtagtagtta 401 aaacagtact atcggattta tcccgcgcgc ataaactaga ttttagcgag 451 cgagccttcg cggcttacgg tatcctttta caaaagggca ctgtagcgac 501 cgtttgtggt cagtttgaca ttaatttagt ttctccatct tgcgtgtag