Sequence of DPV Citrus tristeza virus

Citrus tristeza virus clone 180 P23 gene, complete cds.

ACC No: HQ329242

Dated: 2010-12-29 | Length: 633 | CRC: -619490208

                
ID   HQ329242; SV 1; linear; genomic RNA; STD; VRL; 633 BP.
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AC   HQ329242;
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DT   29-DEC-2010 (Rel. 107, Created)
DT   29-DEC-2010 (Rel. 107, Last updated, Version 1)
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DE   Citrus tristeza virus clone 180 P23 gene, complete cds.
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KW   .
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OS   Citrus tristeza virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Closterovirus.
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RN   [1]
RP   1-633
RA   Atta S.;
RT   "citrus tristeza virus from Pakistan";
RL   Unpublished.
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RN   [2]
RP   1-633
RA   Atta S.;
RT   ;
RL   Submitted (30-SEP-2010) to the EMBL/GenBank/DDBJ databases.
RL   Sequencing Lab, Shanghai Biosune Biotechnology Co. Ltd., Donglan Road No.
RL   248, 5th floor, Shanghai 201102, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .633
FT                   /organism="Citrus tristeza virus"
FT                   /host="Feutrell's Early"
FT                   /mol_type="genomic RNA"
FT                   /country="Pakistan"
FT                   /collection_date="2008"
FT                   /clone="180"
FT                   /db_xref="taxon:12162"
FT   CDS             1. .630
FT                   /codon_start=1
FT                   /product="P23"
FT                   /protein_id="ADU02569.1"
FT                   /translation="MDNTSGQTFISVNLSDESNTASTEVKTVSSEADRLEFLRKMNPFT
FT                   IDALIRKTSYQGARFRARIIGVCVDCGRKHDKVSRTERKCKVNNTQSQNEVAHMLMHDP
FT                   VKYLNKRKARAFSNAEMFAIDLVMHTKEKQLAVDLAAEREKTRLARRHPMRSPEETPEY
FT                   YKFGMTAKAMLPDINAIDVGDNEDTSSEYPVSLSVSGGVLREHHFI"
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SQ   Sequence 633 BP; 193 A; 123 C; 160 G; 157 T; 0 other;

hq329242 Length: 633  29-DEC-2010  Type: N  Check: 764  ..

       1  atggataata ctagcggaca aactttcatt tctgtgaacc tttctgacga
      51  aagcaacaca gctagcactg aagtcaaaac cgtaagttcg gaagcggatc
     101  gcttggaatt tttacggaaa atgaatccct ttactatcga cgccttgata
     151  cggaaaacca gttatcaggg tgctcgcttt cgcgcgagaa taataggagt
     201  gtgcgtggat tgtggtagaa aacacgataa ggtatcgagg actgaacgta
     251  agtgtaaggt caacaataca caatctcaga acgaggtggc gcatatgtta
     301  atgcacgatc ccgtgaaata tttaaataaa agaaaggcta gagccttttc
     351  taacgcagag atgtttgcga tcgatttggt tatgcatacc aaagaaaagc
     401  aattagcggt tgatttggcc gctgaaaggg agaagacgag attggctcgt
     451  agacacccga tgcgttctcc ggaggaaact ccggaatatt ataagttcgg
     501  tatgactgct aaggcaatgt taccggacat caacgctata gacgttggtg
     551  ataacgagga cacttcgtcg gaatacccag tgagtctgag tgtttcaggc
     601  ggagttctcc gtgaacacca cttcatctga ttg