Sequence of DPV Fusarium graminearum virus 2

Fusarium graminearum dsRNA mycovirus-2 isolate 98-8-60 segment RNA 3, complete sequence.

ACC No: HQ343297

Dated: 2011-10-02 | Length: 2982 | CRC: 1134351669

                
ID   HQ343297; SV 1; linear; genomic RNA; STD; VRL; 2982 BP.
XX
AC   HQ343297;
XX
DT   02-OCT-2011 (Rel. 110, Created)
DT   02-OCT-2011 (Rel. 110, Last updated, Version 1)
XX
DE   Fusarium graminearum dsRNA mycovirus-2 isolate 98-8-60 segment RNA 3,
DE   complete sequence.
XX
KW   .
XX
OS   Fusarium graminearum dsRNA mycovirus-2
OC   Viruses; dsRNA viruses; Partitiviridae; unclassified Partitiviridae.
XX
RN   [1]
RP   1-2982
RA   Yu J., Lee K.-M., Son M., Kim K.-H.;
RT   "Molecular characterization of double-stranded RNA mycovirus from Fusarium
RT   graminearum strain 98-8-60";
RL   Unpublished.
XX
RN   [2]
RP   1-2982
RA   Yu J., Lee K.-M., Son M., Kim K.-H.;
RT   ;
RL   Submitted (06-OCT-2010) to the INSDC.
RL   Department of Agricultural Biotechnology, Seoul National University, 599
RL   Gwanak-ro, Daehak-dong, Gwanak-gu, Seoul 151-921, South Korea
XX
CC   GenBank Accession Numbers HQ343295-HQ343300 represent the complete
CC   genome of Fusarium graminearum dsRNA mycovirus-2 isolate 98-8-60.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .2982
FT                   /organism="Fusarium graminearum dsRNA mycovirus-2"
FT                   /segment="RNA 3"
FT                   /host="Fusarium graminearum"
FT                   /isolate="98-8-60"
FT                   /mol_type="genomic RNA"
FT                   /country="South Korea"
FT                   /collection_date="1998"
FT                   /db_xref="taxon:254946"
FT   CDS             106. .2676
FT                   /codon_start=1
FT                   /product="hypothetical protein"
FT                   /note="ORF3"
FT                   /protein_id="ADW08804.1"
FT                   /translation="MASNPLFDRRGGGEQGVSGNNGSSMGRTVKPAFQGDDFFGIASAL
FT                   EMNPNMGVNDMMLVGRDKLMSGKQQANPGLVGWQHDMQRNLATDASAWVVRKEIRDLAG
FT                   LLPDNPNDDTARLETVVTFTYQVEPVNQRADRSHRRDVAVQYKAPSVGDGTVIQFAKST
FT                   KELHYKASAATVSSAAIGYAQQVNSYSRIGISGDMGLAMEVGRGPDMLGVFTVMWLLQL
FT                   DVAGGARVELGIDANDMRVLVPSSVSPLDEADAMKAVPGIRLHSDALDPLAYRLLYTAT
FT                   HRSALGAASPWVNRYRWPTTPLTVYSGALNPGPYMQAFNGRPAAAQLAGQIVNIANTYD
FT                   LRDTCSRAYSIAFSLYGDRCVNRNFRLHCGRQTLFHEISNGQSKAQVPQMCWALGSYQL
FT                   PMAAKFNGYANAEYMRDLCRSTITAGLRIRDRDAVRRAVDQIDVHALKTVQQRFEEGQQ
FT                   LTGALPIDYRHYVKHGIRRAWVVRGILHNLSLGRAVPAAISGSAVKQLRMPSEAELADT
FT                   DVLAYGKERAESEANAWLINELIRNGGTSLCQSVDEAIPRSGATAVLHTDCRYYMGMDL
FT                   QYKIVGFGNDMRIKYNRPLNFVYAPTPTMVTHQRDDQLREPSALPMTVVDKELADDKAD
FT                   DTVVTPEDILREVMQMRGTRTSTLFRGKPPTKAPPVRYHDGDVLTVTAARDDVRQSVVQ
FT                   LAQEGGGPGPTSGENLLCGAHAIQMALEFAGHPNHITVEQLEDELRTAVLDAPVDDDSE
FT                   LRSANNFTADQLGRAANRHGYNLTVVTGQGKGAAVAYSATELVGAPHLVVFNFGGNHWE
FT                   GPVRQGKRHAIRVDGQDAGTPAVEAARARSQRGSVFEKTVNRRR"
XX
SQ   Sequence 2982 BP; 775 A; 749 C; 839 G; 619 T; 0 other;

hq343297 Length: 2982  02-OCT-2011  Type: N  Check: 4419  ..

       1  gcaaaaaaga aaagaagggt aagagtacct caaccgcaca taggtgcgcg
      51  gggagaaatt ttcaaaccgt ggcaaatttg cacaaaccat atttgattta
     101  caagtatggc atcaaaccca ttgttcgaca gacgtggtgg tggtgagcaa
     151  ggtgtgagtg gcaacaacgg cagttccatg gggcgcaccg ttaagccagc
     201  attccagggg gatgatttct ttggaatagc ctctgcactg gagatgaacc
     251  caaacatggg tgtaaacgac atgatgcttg ttggtcggga caagctgatg
     301  tcggggaagc agcaggcaaa ccccggccta gtaggatggc agcacgatat
     351  gcagcgcaac ctagctacag acgcatcggc ctgggtcgta cgcaaggaaa
     401  tacgagatct agctggcctt ctacctgaca accccaacga tgacacagcg
     451  agactagaga ccgtggtcac gttcacatac caggtcgaac ctgttaacca
     501  gcgggctgat cgatcacacc gccgcgatgt ggctgtgcaa tacaaagccc
     551  cctcggtagg cgatggtaca gtcatccagt tcgctaaatc cactaaagag
     601  ttgcactaca aggcgagcgc agctacggtg tcatccgccg ctatagggta
     651  tgctcagcag gtgaattcct attcccggat tggcatctct ggtgacatgg
     701  gcctggcaat ggaggttggt cgtggaccgg atatgctggg tgtgttcacg
     751  gtgatgtggc tgttgcaact cgatgtggcg ggtggagcac gtgtagagct
     801  cggcatagac gcgaatgata tgcgcgtgct agtgccatca tcagtgtcac
     851  ccctggacga agctgacgca atgaaggcag tgcccggcat caggcttcat
     901  tcagacgccc tcgaccctct agcataccgg ctgctgtaca ctgcgacgca
     951  ccgatcagcc cttggcgccg catctccgtg ggtcaacagg tatcgctggc
    1001  caaccacacc gctaactgtg tatagcggcg cactaaaccc gggaccgtat
    1051  atgcaagcat tcaatggtag gcctgcagct gcacagctag ccgggcagat
    1101  tgttaacatt gcgaacacgt atgacctgcg tgacacgtgc agtcgtgctt
    1151  acagcatcgc attctctctt tacggtgatc gctgtgtgaa caggaatttc
    1201  cgcctgcact gcggtaggca gacactgttc catgaaatca gtaatgggca
    1251  gagcaaagca caggtgcctc aaatgtgttg ggccctcggt agttaccagc
    1301  tgcccatggc ggcaaagttc aacgggtatg cgaacgcaga gtacatgcgc
    1351  gacctgtgcc gctctacgat aaccgctggc ttgcgcatca gggaccgtga
    1401  cgctgtccga cgggccgttg accaaatcga tgtgcatgcc ctcaaaactg
    1451  tgcagcaacg ctttgaggaa gggcagcaac taacgggtgc gctaccaata
    1501  gactacaggc attatgttaa gcatggcatc cgacgtgctt gggtcgttcg
    1551  aggtatcttg cacaacctct cacttggccg tgctgtgcca gcagcgatca
    1601  gcggctcagc agtcaaacaa ttacgcatgc caagtgaagc agaactagcg
    1651  gacactgacg tgctggcgta tgggaaagag cgtgcagagt cagaagcaaa
    1701  tgcgtggctc ataaatgagc tgatacgaaa cggtggcact agcttatgcc
    1751  agagtgtaga tgaggccata ccacgatctg gcgcaaccgc ggtgctacac
    1801  accgattgcc gttattacat gggcatggat ctgcaataca agattgttgg
    1851  attcggtaat gatatgcgca taaagtacaa caggccgctc aactttgtgt
    1901  atgcacctac acccacaatg gtaacacacc agcgtgatga tcaactgcgt
    1951  gaaccaagtg cactaccaat gactgtggtg gacaaggagc tagcagatga
    2001  caaagctgac gacactgttg tgaccccgga agatatactg cgtgaggtaa
    2051  tgcagatgcg cggcactcgc acgtcaacgt tattcagggg aaaaccaccc
    2101  acaaaagcac cgcctgtccg gtaccacgat ggtgacgttt tgactgtgac
    2151  cgccgcccgt gatgatgtgc gccaatctgt ggtccaacta gcccaggaag
    2201  gtggtggtcc gggacccacc agcggtgaaa atctactgtg tggtgctcat
    2251  gcgatacaga tggcgctaga attcgcaggt caccccaacc acataacagt
    2301  agaacagttg gaggatgagc tgcgcactgc cgtgctcgat gcacccgtgg
    2351  atgatgactc ggaattgcgg agtgcaaaca atttcacggc agatcaattg
    2401  ggcagagcag ctaatcgaca cgggtataat ctgacagtcg tgacagggca
    2451  aggcaaaggt gccgcagtgg catacagcgc aacggagctg gtcggtgcac
    2501  cccaccttgt tgtgttcaac ttcggaggca atcactggga aggtccagtc
    2551  cggcagggta agcgtcatgc aatacgagta gacggtcaag atgcaggtac
    2601  gccagcggtg gaagcggcac gagcccggtc ccagcgtggc agcgtgtttg
    2651  agaagaccgt gaaccgtcga cgttaaatca taaacaataa atagttaatt
    2701  ggtattaccg gttaatctat tgccaaattg gcgccagtag caacacactc
    2751  gcaagctacg ccacagtctg tacagcactg ctgcccagaa tgtcgccaaa
    2801  ttaggtattt aaggagaacc cttaaatggc actcatgaat gtgaacaagt
    2851  gatttggttc gaaaatactt gtgtaattgt attacagtta tacgaggccg
    2901  gataggcaag ctagcagcag ttcggtacta ccgtggtgtt gcaaaccgca
    2951  taaggtatta aagtcccatg actttaatgg cg