Sequence of DPV Fusarium graminearum virus 2
Fusarium graminearum dsRNA mycovirus-2 isolate 98-8-60 segment RNA 4, complete sequence.
ACC No: HQ343298
Dated: 2011-10-02 | Length: 2748 | CRC: 1250698880
ID HQ343298; SV 1; linear; genomic RNA; STD; VRL; 2748 BP.
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AC HQ343298;
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DT 02-OCT-2011 (Rel. 110, Created)
DT 02-OCT-2011 (Rel. 110, Last updated, Version 1)
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DE Fusarium graminearum dsRNA mycovirus-2 isolate 98-8-60 segment RNA 4,
DE complete sequence.
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KW .
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OS Fusarium graminearum dsRNA mycovirus-2
OC Viruses; dsRNA viruses; Partitiviridae; unclassified Partitiviridae.
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RN [1]
RP 1-2748
RA Yu J., Lee K.-M., Son M., Kim K.-H.;
RT "Molecular characterization of double-stranded RNA mycovirus from Fusarium
RT graminearum strain 98-8-60";
RL Unpublished.
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RN [2]
RP 1-2748
RA Yu J., Lee K.-M., Son M., Kim K.-H.;
RT ;
RL Submitted (06-OCT-2010) to the INSDC.
RL Department of Agricultural Biotechnology, Seoul National University, 599
RL Gwanak-ro, Daehak-dong, Gwanak-gu, Seoul 151-921, South Korea
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CC GenBank Accession Numbers HQ343295-HQ343300 represent the complete
CC genome of Fusarium graminearum dsRNA mycovirus-2 isolate 98-8-60.
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FH Key Location/Qualifiers
FH
FT source 1. .2748
FT /organism="Fusarium graminearum dsRNA mycovirus-2"
FT /segment="RNA 4"
FT /host="Fusarium graminearum"
FT /isolate="98-8-60"
FT /mol_type="genomic RNA"
FT /country="South Korea"
FT /collection_date="1998"
FT /db_xref="taxon:254946"
FT CDS 79. .2586
FT /codon_start=1
FT /product="hypothetical protein"
FT /note="ORF4"
FT /protein_id="ADW08805.1"
FT /translation="MTTTFWKSTESTDSNSDLAEQRAVHSTEYAVCTIYQAWGLPSTPY
FT SLGGKPDQWEFTTKDEGSGPSKLTGNVVDGFGTLFSDRLFNLPSKREVTFFLHSDTAIE
FT MRIINSNTFDRLENSCICVEVCIVSRASPVQKHRPVVLHFWVYDEFSGGQIKVVLVETA
FT YDYSPFLRIDRSGIGAAIRSITSIHTLGQTGTLNGSNVFSVVPWDANKLQSCSVKDLRR
FT LFVSTSNGKTAKLKTPLDIKQAAEYPLLIYLGTSNDHENATRMVLSGGAKTNPIRYVRY
FT WHNYSLEPEDARTRSAVMTANDPSAMLPSNVLVLATNGGKQVTATCVAVRVRADGRYLY
FT STMRRNCLPYTDQVKFTSIVPSAHNLIMERSFAVDNWGSIMRVNTNNRPVVVHTAVTEV
FT IRNAALGTTDTTVYVRHVLDAFGTICSLMDRTAGLSYEIPQDKNFCQIRWKHDALALKG
FT TLFIASAVNPGTCLLGVLGSWQNWAGPGSGGGQIPQSQEYWYPIDGRGGKDCYGELMYL
FT DGGFSLLGRYLYQDVINSGQYLDLTSTLVPKALRDDGLITDNLRVYVGPHEGDKVNFML
FT DIEYTDLPGGDSKTPTAIGYCAVQQGESFSSGLSTMHATTLDGYGLITDPKGSAKLDQT
FT LQQRVGKHRQLSKRYTSSNLWEDLAVLQTLALSSNSVQLWAKGADNDAAFLVAATPVNS
FT SSCPTWNSIKHEGAGLVANGTLLDIGGELPKFAALAKRHKVSSEHNPCIESALFAIEAG
FT IWRKTPDLATVRLSTTSLAEGLADLLTRLYSQDVLIKGDDGAEWVEGITETFDIHVISP
FT DHPAREALRIVTDRVIAASKGAN"
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SQ Sequence 2748 BP; 728 A; 664 C; 714 G; 642 T; 0 other;
hq343298 Length: 2748 02-OCT-2011 Type: N Check: 8186 ..
1 gcaaaaaaga gaataaagcc atttgtgcac ataggtgcgc ggggagaaat
51 tttcaaaccg tggcaaattt gcaataagat gacaaccaca ttctggaagt
101 caacagagtc aactgactca aactcggatt tggccgagca gcgtgccgtg
151 cactcaactg agtacgcggt gtgcaccata tatcaagctt ggggcttacc
201 atccacccca tactcattgg gtggcaagcc tgaccagtgg gagttcacaa
251 ccaaggatga gggctcagga ccaagcaagt taacggggaa tgtcgtcgat
301 ggattcggta cgctattcag tgataggttg ttcaatctac catcaaagcg
351 tgaggtcacg ttcttcctgc actcggacac ggccatagag atgcgcataa
401 taaactcaaa tacgttcgac cggctcgaga attcatgtat ttgtgttgaa
451 gtctgtattg ttagccgagc ctcacctgtc cagaagcatc gacccgttgt
501 tctgcacttc tgggtgtacg atgaattttc cggcggccaa attaaggtgg
551 tactggtcga gacagcatat gactattcgc cattcctgcg catagaccgc
601 tcagggattg gtgccgcaat tcgttccatc acttcgatcc acactctggg
651 acaaaccggt actctaaacg gcagcaacgt gtttagtgta gtgccgtggg
701 acgcaaacaa gctccagtcc tgtagtgtca aggatctgcg ccgcctgttc
751 gtgtcaacaa gcaacgggaa gacagctaaa ttaaaaacgc cgcttgacat
801 caagcaagca gcagaatacc cgctgctgat ttacctgggg acatcaaatg
851 accacgagaa tgcaacacgc atggtgctct ccggtggcgc aaaaacgaac
901 ccgatacgct acgtgcgtta ttggcacaat tactcgctgg aacctgaaga
951 tgcacggact cgcagcgctg tgatgaccgc aaatgatcca tccgcgatgt
1001 taccaagcaa cgtccttgtt ttggcaacca atgggggaaa acaagtaact
1051 gcaacatgtg ttgccgtaag agtgcgtgcc gacggccgct acttatacag
1101 cacaatgcga cgtaattgtt tgccttacac tgaccaagtt aagttcacca
1151 gcatcgtccc gtccgctcat aacttgatta tggaacgatc ttttgctgtc
1201 gacaattggg gctccatcat gcgcgtcaat acaaacaata ggcctgttgt
1251 tgtccacaca gccgtgacgg aagtgatccg taacgctgca ctgggtacga
1301 cagacacgac agtgtacgtt aggcacgtgc tggatgcttt cggcaccata
1351 tgcagcctta tggatcgtac ggccggcctg tcttatgaga taccccagga
1401 caagaacttt tgtcaaatac gctggaagca tgatgcattg gctctcaaag
1451 gcactttgtt cattgcaagc gcagtaaacc ccggcacttg cttactgggt
1501 gtgctgggct cgtggcaaaa ttgggctggg cctggatccg gcggtggtca
1551 aattccgcag tcacaagaat actggtaccc aattgatggc cgtggcggca
1601 aagattgtta tggcgaatta atgtacttgg atggcggctt tagtctacta
1651 ggtcgctatt tgtatcaaga tgtgattaac tcaggccaat acctggacct
1701 aaccagcacg ctcgtgccca aagcgttgcg tgacgatggg ctgatcactg
1751 acaacctgcg tgtgtacgtc ggtccgcatg agggcgataa ggtcaacttc
1801 atgctggaca tagagtacac ggacttgcct gggggtgatt caaaaacccc
1851 aacggcgata gggtactgcg ctgtgcaaca aggcgaatca ttctcatcag
1901 gcctaagtac catgcatgcc actaccctgg acggttacgg cttaatcaca
1951 gaccctaagg gtagtgcgaa gttggaccaa actttgcagc agcgtgtggg
2001 taagcatagg cagttgagta aacgctacac ttctagcaat ttgtgggaag
2051 atttggctgt actacaaaca ttggcacttt cgtctaattc cgtacagtta
2101 tgggccaaag gcgcggataa tgacgctgcg ttcttagtag cagccacgcc
2151 ggttaacagc agttcatgcc ccacatggaa tagcataaaa cacgaggggg
2201 cgggcctagt ggcaaacggc accttactcg atatcggtgg tgagttgccg
2251 aagtttgccg cactggcgaa aaggcacaaa gtgtcaagtg agcataaccc
2301 atgtatagag tcggcactct ttgcaataga agctggcata tggaggaaaa
2351 ctcccgacct tgctacggta cgtctatcaa caacgagtct tgctgaggga
2401 ctcgccgatt tgttgacccg attgtactcc caagacgtgt taattaaagg
2451 cgacgatgga gcagaatggg tcgaaggcat aactgagacg ttcgatatac
2501 acgttatctc accagaccat ccggcgcgtg aggcgttgcg aatagtgaca
2551 gacagggtta ttgcagccag taagggcgca aattaaatgc tcagctcgta
2601 atgggcatat gctgaggtat tactgacagt gtatgtgcga caagatcgtc
2651 cgctaccaac aatgagctaa gtccagctat cacgttattg gtaatgccac
2701 taacgtttta tccgtataag gtattaaagt tcacaacttt aatggcag