Sequence of DPV Grapevine leafroll-associated virus 3
Grapevine leafroll-associated virus 3 isolate Touriga Nacional-2 coat protein gene, complete cds.
ACC No: HQ401019
Dated: 2011-03-04 | Length: 942 | CRC: 1666300970
ID HQ401019; SV 1; linear; genomic RNA; STD; VRL; 942 BP. XX AC HQ401019; XX DT 23-DEC-2010 (Rel. 107, Created) DT 04-MAR-2011 (Rel. 108, Last updated, Version 2) XX DE Grapevine leafroll-associated virus 3 isolate Touriga Nacional-2 coat DE protein gene, complete cds. XX KW . XX OS Grapevine leafroll-associated virus 3 OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Ampelovirus. XX RN [1] RP 1-942 RX PUBMED; 21153745. RA Gouveia P., Santos M.T., Eiras-Dias J.E., Nolasco G.; RT "Five phylogenetic groups identified in the coat protein gene of grapevine RT leafroll-associated virus 3 obtained from Portuguese grapevine varieties"; RL Arch. Virol. 156(3):413-420(2011). XX RN [2] RP 1-942 RA Gouveia P., Santos M.T., Eiras-Dias J.E., Nolasco G.; RT ; RL Submitted (11-OCT-2010) to the EMBL/GenBank/DDBJ databases. RL Center for Biodiversity, Functional and Integrative Genomics, Universidade RL Do Algarve, Campus de Gambelas, Faro 8005-139, Portugal XX FH Key Location/Qualifiers FH FT source 1. .942 FT /organism="Grapevine leafroll-associated virus 3" FT /host="Vitis vinifera; cultivar Touriga Nacional" FT /isolate="Touriga Nacional-2" FT /mol_type="genomic RNA" FT /country="Portugal" FT /collection_date="Jan-2008" FT /db_xref="taxon:55951" FT CDS 1. .942 FT /codon_start=1 FT /product="coat protein" FT /note="capsid protein" FT /db_xref="InterPro:IPR002679" FT /db_xref="UniProtKB/TrEMBL:E2CV40" FT /protein_id="ADT89787.1" FT /translation="MAFELKLGQIYEVVPENNLRVRVGDAAQGKFSKASFLKYVKDGTQ FT AELTGIAVVPEKYVFATAALATAAQEPPKQPTTQVVEPPEADIGVVPESETLTPNKLVF FT EKDPDKFLKTMGKGIALDLTGVTHKPKVINEPGKVSVEVAMKINTALVELCKKVMGSDD FT TTTKTKFFLYVMQIACTFFTSSSTEFKEFDYIETDDGKKIYAVWVYDCIKQAAASTGYE FT NPVRQYLAYFTPTLITATLNGKLVMNEKVMAQHGVPPKFFPYAIDCVRPTYDLFNNDAI FT LAWNLARQQAFRNKTVTADNTLHNVFQLLQKK" XX SQ Sequence 942 BP; 298 A; 189 C; 246 G; 209 T; 0 other; hq401019 Length: 942 04-MAR-2011 Type: N Check: 5328 .. 1 atggcatttg aactgaaatt agggcagata tatgaagttg tccccgaaaa 51 caatctgaga gttagagtag gggatgcggc acaaggaaag tttagtaagg 101 cgagtttctt aaaatacgtt aaggacggga cgcaggcgga gttaacagga 151 atcgctgtag tgccggaaaa gtacgtattc gccacagcag ctttagctac 201 agcggcacag gagccaccta agcagccgac aacgcaagtg gtggaaccac 251 cagaagccga tataggggtg gtgccggaat ctgagactct tacaccaaat 301 aagctggttt ttgagaaaga tccagacaag ttcttaaaga ctatgggtaa 351 ggggatagct ttggacttaa cgggggttac ccataaaccg aaagttatta 401 acgagccggg aaaagtatca gtagaggtag caatgaagat taataccgca 451 ttggtagagc tgtgtaagaa ggttatgggc tccgatgaca caacaaccaa 501 gacaaaattc ttcttgtacg tgatgcagat cgcttgcacg ttctttacat 551 cgtcttcgac ggagttcaaa gagttcgact acatagaaac ggacgatgga 601 aagaagatat atgcggtgtg ggtatacgat tgcattaaac aagctgccgc 651 ttcaacgggt tacgaaaacc cggtaaggca gtatctagca tacttcacgc 701 caaccttgat cacggcgacc ctgaatggta aactggtgat gaatgaaaag 751 gtcatggcac agcatggagt accaccgaaa ttctttccgt acgcgattga 801 ctgcgttcgt ccgacgtacg atctgttcaa taacgacgca atactagcat 851 ggaatttagc taggcagcag gcgtttagaa ataagacggt gacggccgat 901 aacaccttac acaacgtctt ccaactattg cagaagaaat ag