Sequence of DPV Scylla serrata reovirus SZ-2007
Scylla serrata reovirus SZ-2007 segment 5, complete sequence.
ACC No: HQ414131
Dated: 2012-01-05 | Length: 2388 | CRC: -1155834288
ID HQ414131; SV 1; linear; genomic RNA; STD; VRL; 2388 BP. XX AC HQ414131; XX DT 06-DEC-2011 (Rel. 111, Created) DT 05-JAN-2012 (Rel. 111, Last updated, Version 2) XX DE Scylla serrata reovirus SZ-2007 segment 5, complete sequence. XX KW . XX OS Scylla serrata reovirus SZ-2007 OC Viruses; dsRNA viruses; Reoviridae; unclassified Reoviridae. XX RN [1] RP 1-2388 RX PUBMED; 22088215. RA Deng X.X., Lu L., Ou Y.J., Su H.J., Li G., Guo Z.X., Zhang R., Zheng P.R., RA Chen Y.G., He J.G., Weng S.P.; RT "Sequence analysis of 12 genome segments of mud crab reovirus (MCRV)"; RL Virology 422(2):185-194(2012). XX RN [2] RP 1-2388 RA Deng X., Lv L., Ou Y., Li G., Guo Z., Zhang R., Su H., Zheng P., He J., RA Weng S.; RT ; RL Submitted (18-OCT-2010) to the INSDC. RL School of Life Sciences, Sun Yat-sen University, MOE Key Laboratory of RL Aquatic Product Safety/State Key Lab for Biocontrol, 135 Xingang Road West, RL Guangzhou, Guangdong 510275, China XX CC GenBank Accession Numbers HQ414127-HQ414138 represent the complete CC genome of Scylla serrata reovirus SZ-2007. XX FH Key Location/Qualifiers FH FT source 1. .2388 FT /organism="Scylla serrata reovirus SZ-2007" FT /segment="5" FT /host="Scylla serrata (mud crab)" FT /isolate="Southern China" FT /mol_type="genomic RNA" FT /country="China" FT /collection_date="Aug-2004" FT /db_xref="taxon:458682" FT gene 56. .1675 FT /locus_tag="MCRV_s5p1" FT CDS 56. .1675 FT /codon_start=1 FT /locus_tag="MCRV_s5p1" FT /product="VP5" FT /protein_id="AEQ75470.1" FT /translation="MDRNKTFQIPHHAPHRDIFSATTEEVAEMHEQLKSGSLLRGFLVI FT EQGQGPYYVVVVDESVHQGWIYNARTPQLEVRKIVNGVYIGQNVVPDERGIMHPGTGEP FT YHDLLIKLLDDGLIPYYQYQPLNVSGALDLTDEFSTESVQLDSYGKRTSKFEFFPSSSL FT SKLRNANIPCRRISRVETVRCDWPHVFVLDPYNCTMVRLPVLRSFSGVSYEADVQQEKT FT VYLVYNPLEFIGIWYVGSGRTIALQRVWVKRMLRDAITSDFCDAVESRARVTPSIQQLF FT TDAIHSKSKRQDDHTKWIDMLFKSNLPRFVMLKKFLSLCNMKNIQIESDKARDYILYDN FT QYILTIFHDKNGWIAVYDSNVERVLDTMVSVAPTPRHTPIKFSKPYRYMVHRIVGREHV FT LALRLAELGLVPNGQGNICTDCSSGSGDYMDHVQNRCLYTLRTLGLYVCTSSYTPQWIK FT EELERQKIPVQYRNGAFGPMLTHSKIPLTLSQAISVLMGNSVRGPQGAGALMQISYYGV FT VVPPVSRKNRPRRKMTRFDNRT" XX SQ Sequence 2388 BP; 683 A; 455 C; 481 G; 769 T; 0 other; hq414131 Length: 2388 05-JAN-2012 Type: N Check: 5117 .. 1 ataaatttct ctgcacgtgg atttccgcga tcaacgagta tagcacgaac 51 ttagtatgga tcgtaacaag acttttcaga ttccacatca tgccccgcat 101 cgcgacatat tctctgccac aacagaggaa gttgcagaaa tgcatgaaca 151 actgaagagc ggttcactac tgagagggtt tctcgtgatt gaacaagggc 201 agggacctta ctatgttgtt gttgtagatg aatcagtaca ccaaggatgg 251 atttacaatg ccagaacacc tcagcttgaa gttaggaaga ttgtcaatgg 301 tgtttacatc ggccagaatg ttgtaccaga tgaacgtggc ataatgcacc 351 caggtacagg agagccgtat cacgacctgt tgattaagtt gctagatgac 401 ggattgattc catactacca gtatcaacct ttaaatgttt caggagcatt 451 ggatttgaca gatgagttta gtaccgaatc agtgcaattg gattcatatg 501 gaaagcgcac tagtaaattt gaatttttcc cttcttcaag tttgtcaaaa 551 ttgcgcaatg caaacatacc atgcagacga atatcaagag ttgaaactgt 601 taggtgtgac tggcctcatg tgtttgttct agacccttac aactgcacca 651 tggttaggtt acctgtattg cgttctttct ccggtgtcag ttacgaggca 701 gatgttcaac aagagaagac ggtgtacttg gtttacaatc ctttggagtt 751 tattggcata tggtatgtag gtagtggtag aactattgca ttacagagag 801 tctgggttaa acgaatgctt cgtgacgcca ttacatctga tttttgtgat 851 gctgtggaat ctagagcaag agttacacca agtatccagc aactattcac 901 tgatgcaatc cacagcaagt caaaaagaca ggatgatcat acaaagtgga 951 tagatatgct ctttaaatct aatttacccc ggtttgtcat gcttaaaaag 1001 tttctctctc tttgtaatat gaaaaacatt caaatcgaaa gtgataaggc 1051 cagagactac attctgtatg ataatcagta tattcttaca atatttcatg 1101 ataaaaatgg atggattgca gtttatgata gtaatgtgga gagagtccta 1151 gataccatgg tgtcagtggc tcctacacca agacatacac caatcaaatt 1201 cagcaaacct tatagataca tggtgcatcg cattgtcggt agagagcatg 1251 ttctagcgtt gcggttggct gagttaggac tcgtacctaa tggtcagggt 1301 aacatctgta ctgattgctc ttctggaagt ggagattata tggatcatgt 1351 tcagaacaga tgtctgtaca ctctgagaac cttaggactt tacgtatgta 1401 ccagctcata cacacctcaa tggattaaag aagaattaga acgtcagaag 1451 attccagtgc aatatagaaa tggagccttc gggccaatgc tgacacattc 1501 caaaatacca ttgacactca gccaagcaat aagcgttctt atgggaaaca 1551 gcgttagagg gccacaaggt gcaggcgcgc tgatgcagat ctcttactat 1601 ggagtggttg tcccaccagt ctcacgtaag aatcgtccca gacgcaagat 1651 gacccggttt gacaatagaa cttaagctgt tatatacatc agcacatacc 1701 cctagcgtta agcagttcat tatattcttg atgtttatgt cactacttat 1751 atataatgca tactatattt ccttcttaca tttattgtgt ttttatgtta 1801 gtatatgtaa tagatctttg cttgtattga tggttgtatc gcatcatgca 1851 tcttttacca ttgctctact tgtataatct aatctattaa taatgtcaca 1901 tttaaccttg ttacatttat ctgtcttcta ttattatata tgtataacta 1951 tgtagctgtg tggacttata tggttaccct tattgtatta tgattatgtg 2001 atgtaatgtt gtattttatg tattttatgt atttcatgtt tcacttcaat 2051 tggtttaaac tttctttcct tttgtgaaat tagtcgttgt tccaaaatct 2101 gggcgtccac ttcatgctaa ctttctttgt atctgctttt atcatctccc 2151 tataaactat tcattatgtt ctttgctgct attgatggta gtaactgact 2201 agctctctta ctattatcat atacactgca tttccttatc aaacaagttt 2251 catttatttt cattactgtt tctgaaacta tattttcgca ttggcgtgcg 2301 ccgtatgatc tgccgattga agcgcgggct gcactggaca tggacccccc 2351 aggagtagcc ctaatgactg agaaacaaga acaacgat