Sequence of DPV Abutilon mosaic virus
Abutilon mosaic virus strain IN-Udg-JIX12-2010 segment DNA-A, complete sequence.
ACC No: HQ588901
Dated: 2011-01-28 | Length: 2637 | CRC: 1319976623
ID HQ588901; SV 1; circular; genomic DNA; STD; VRL; 2637 BP.
XX
AC HQ588901;
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DT 10-JAN-2011 (Rel. 107, Created)
DT 28-JAN-2011 (Rel. 107, Last updated, Version 2)
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DE Abutilon mosaic virus strain IN-Udg-JIX12-2010 segment DNA-A, complete
DE sequence.
XX
KW .
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OS Abutilon mosaic virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-2637
RA Malathi V.G., Haq Q.M.I., Jyothsna P., Prakash J.;
RT "Unique occurrence of Abutilon mosaic virus in India";
RL Unpublished.
XX
RN [2]
RP 1-2637
RA Malathi V.G., Haq Q.M.I., Jyothsna P., Prakash J.;
RT ;
RL Submitted (07-NOV-2010) to the EMBL/GenBank/DDBJ databases.
RL Advanced Centre for Plant Virology, Indian Agricultural Research Institute,
RL Pusa Campus, New Delhi, Delhi 110012, India
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FH Key Location/Qualifiers
FH
FT source 1. .2637
FT /organism="Abutilon mosaic virus"
FT /segment="DNA-A"
FT /host="Abutilon"
FT /strain="IN-Udg-JIX12-2010"
FT /mol_type="genomic DNA"
FT /country="India:Udagamandalam(Ooty)"
FT /collected_by="VG Malathi"
FT /collection_date="27-Apr-2010"
FT /db_xref="taxon:10815"
FT gene 202. .957
FT /gene="AV1"
FT CDS 202. .957
FT /codon_start=1
FT /gene="AV1"
FT /product="coat protein"
FT /protein_id="ADU54610.1"
FT /translation="MPKRDLPWRSMPGTSKTSRNANYSPRARTGPRVDKASEWVHRPMY
FT RKPRIYRTLRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNDITHRVGKRF
FT CVKSVYILGKIWMDENIKLQNHTNSVMFWLVRDRRPYGTPMDFGHVFNMFDNEPSTATV
FT KNDLRDRYQVMHKFYGKVTGGQYASNEQALVKRFWKVNNHVVYNHQEAGKYENHTENAL
FT LLYMACTHASNPVYATLKIRIYFYDSLVN"
FT gene complement(535. .825)
FT /gene="AC5"
FT CDS complement(535. .825)
FT /codon_start=1
FT /gene="AC5"
FT /product="unknown"
FT /protein_id="ADU54615.1"
FT /translation="MIVDHMIVDLPETLDECLFIAGILSTCDLAIELMHDLVTIAEIVL
FT HSGSTGLVVEHVEHMTKIHGRAIRSTVSDQPEHDTVRVVLELDVLVHPDLP"
FT gene complement(954. .1352)
FT /gene="AC3"
FT CDS complement(954. .1352)
FT /codon_start=1
FT /gene="AC3"
FT /product="replication enhancing protein"
FT /protein_id="ADU54613.1"
FT /translation="MDSRTGELITVHQAENGVYTWEIQNPLYFRIYKVEDPLYTRTRIY
FT HVQIRFNHNLRRALHLHKAYLNFQVWTTSMTASGSNYLARFRRLVNMYLDQLGVITINN
FT VIRAVQFTTDRTYVNYVLENHSIKFKFY"
FT gene complement(1099. .1488)
FT /gene="AC2"
FT CDS complement(1099. .1488)
FT /codon_start=1
FT /gene="AC2"
FT /product="transcription activator protein"
FT /protein_id="ADU54612.1"
FT /translation="MRSSSPSHPPSIRKAHRQAKRRAVRRRRIDLQCGCSIYFHIDCAG
FT HGFTHRGTHHCTSGGEWRVYLGDTKSPVFQDIQSRGPTIHQNEDIPCANKVQPQPEESV
FT ASPQSLPELPSLDDIDDSFWVKLFS"
FT gene complement(1400. .2485)
FT /gene="AC1"
FT CDS complement(1400. .2485)
FT /codon_start=1
FT /gene="AC1"
FT /product="replication initiation protein"
FT /protein_id="ADU54611.1"
FT /translation="MPPQKKFRIQAKNYFITYPQCSLNKEEALSQLLNLETAVNKKFIK
FT ICRELHENGEPHLHVLIQFEGKYRCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYI
FT DKDGDTAEWGEFQIDGRSARGGQQTANDSYAKALNAGNVQSALNILKEEQPKDYVLQNH
FT NIRSNLERIFAKAPEPWVPPFPLSSFTAVPENMQEWADDYFGSGSAARPYRPLSLIVEG
FT DSRTGKTMWARALGPHNYLSGHLDFNGRVYSNEVRYNVIDDVTPQYLKLKHWKELLGAQ
FT KDWQSNCKYGKPVQIKGGIPAIVLCNPGEGSSYKEYLDKEENTGLRNWTLKNAIFITLT
FT SPLYQEGTQASQEEGRQATED"
FT gene complement(2071. .2328)
FT /gene="AC4"
FT CDS complement(2071. .2328)
FT /codon_start=1
FT /gene="AC4"
FT /product="PTGS suppressor"
FT /protein_id="ADU54614.1"
FT /translation="MGSLISMCSYNSKANTDARITDSSIWSPQPGQHISIQTYRELNPA
FT PTSSPTLTRTVIQLNGENSRSTADLLGEANRLLMIHMPRR"
XX
SQ Sequence 2637 BP; 643 A; 608 C; 614 G; 772 T; 0 other;
hq588901 Length: 2637 28-JAN-2011 Type: N Check: 5202 ..
1 accggatggc cgcgcgtccc ccctggtgcc gtacactctc gcgcgctttt
51 tcaacctttt atttagaata aaaggtagtc cctggcgcat cgtccaatca
101 taatgcgcct gaccagtcaa tataaattga acaacttggg cgttaagttg
151 ttgggttttc tataaatgaa aagcccattg gcccacgagc tttaactcaa
201 aatgcctaag cgcgatctcc catggcgatc aatgcctggt acatcaaaga
251 ccagccgcaa cgctaattat tctcctcgtg ctcgtactgg gccaagagtt
301 gacaaggcct ctgaatgggt gcacaggccc atgtacagga agcccaggat
351 ctaccgaacg ctgaggacgc ccgatgtgcc cagaggctgt gaagggcctt
401 gtaaggtcca gtcgtatgaa cagcgtcacg acatctcaca tgttggcaag
451 gtaatgtgca tctctgatgt gacacgtggt aatgacatta cccaccgtgt
501 gggtaagcgt ttctgtgtca agtctgtgta tattttaggg aagatctgga
551 tggacgagaa catcaagctc cagaaccaca cgaacagtgt catgttctgg
601 ttggtcagag accgtagacc gtatggcacg cccatggatt ttggtcatgt
651 gttcaacatg ttcgacaacg agcccagtac tgccactgtg aagaacgatc
701 tccgcgatcg ttaccaggtc atgcataagt tctatggcaa ggtcacaggt
751 ggacagtatg ccagcaatga acaggcactc gtcaagcgtt tctggaaggt
801 caacaatcat gtggtctaca atcatcaaga ggctggcaag tacgagaatc
851 acacggagaa cgctctacta ttgtatatgg catgtactca tgcttctaac
901 cccgtttatg caactctaaa gatccgaatc tatttctatg attcgctcgt
951 taattaataa aatttgaatt ttattgaatg attttccagt acatagttta
1001 catacgttct gtctgtcgta aactgaacag ctctaattac attgttaatg
1051 gtaatcacgc ctaactgatc taagtacatg ttgactaaac gcctaaatct
1101 agctaaataa tttgacccag aagctgtcat cgatgtcgtc caaacttgga
1151 agttcaggta agctttgtgg agatgcaacg ctctcctcag gttgtggttg
1201 aaccttattt gcacatggta tatcctcgtt ctggtgtata gtgggtcctc
1251 tactttgtat atcctgaaat acaggggatt ttgtatctcc caggtataca
1301 cgccattctc cgcctgatgt acagtgatga gttcccctgt gcgtgaatcc
1351 atgtcctgca cagtctatgt ggaagtagat ggagcacccg cactgcagat
1401 caatcctccg tcgcctgacg gccctcctct tggcttgcct gtgtgccttc
1451 ctgatagagg ggggatgtga gggtgatgaa gatcgcattc ttgagagtcc
1501 agttcctgag acctgtattt tcctctttgt ccaggtactc tttatagctg
1551 gaaccctcac caggattgca aagcacgatt gctgggattc ctcctttaat
1601 ttgaaccggc ttgccgtatt tgcaatttga ttgccagtct ttctgggccc
1651 ccagcaattc tttccaatgc tttagcttta gatattgcgg tgtgacgtca
1701 tcaatgacgt tatacctcac ttcatttgaa tagacgcgac cattgaagtc
1751 caggtgtcca ctgagatagt tatgtgggcc taacgcacgt gcccacatcg
1801 tcttccctgt ccttgaatca ccttcgacta tgagacttaa tggtctatat
1851 ggccgcgcag cggaaccact cccaaaataa tcatccgccc actcctgcat
1901 gttttcgggg acggcagtga aagatgatag gggaaacgga ggaacccatg
1951 gttccggagc ctttgcgaat attctctcga gattggagcg gatgttatga
2001 ttctgaagga cataatcttt tggctgttct tccttcagaa tgtttaaggc
2051 agattgaaca tttcctgcat tcaacgcctt ggcatatgaa tcattagcag
2101 tctgttggcc tcccctagca gatctgccgt cgatctggaa ttctccccat
2151 tcagctgtat caccgtcctt gtcaatgtag gacttgacgt cggagctgga
2201 tttagctccc tgtatgtttg gatggaaatg tgctgacctg gttggggaga
2251 ccagatcgaa gaatctgtta ttcgtgcatc ggtatttgcc ttcgaattgt
2301 atgagcacat ggagatgagg ctccccattt tcgtgaagct ctctacagat
2351 tttgatgaac ttcttgttca ctgctgtttc taggtttagt aattgggaaa
2401 gtgcctcctc tttattaaga gagcactggg gatatgtgat gaaataattt
2451 ttggcttgta ttctaaattt cttttgcggt ggcatttttg taataagaat
2501 ggttactcta gatagatgag gtgctccagt tgaggctcct caaaacttgc
2551 tcatgtaatt ggagcattgg agctctttat atactagaac tctcattaac
2601 ggatttgcaa cacgtggcgg ccatccgcta taatatt