Sequence of DPV Abutilon mosaic virus
Abutilon mosaic virus strain IN-Udg-JIX12-2010 segment DNA-A, complete sequence.
ACC No: HQ588901
Dated: 2011-01-28 | Length: 2637 | CRC: 1319976623
ID HQ588901; SV 1; circular; genomic DNA; STD; VRL; 2637 BP. XX AC HQ588901; XX DT 10-JAN-2011 (Rel. 107, Created) DT 28-JAN-2011 (Rel. 107, Last updated, Version 2) XX DE Abutilon mosaic virus strain IN-Udg-JIX12-2010 segment DNA-A, complete DE sequence. XX KW . XX OS Abutilon mosaic virus OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2637 RA Malathi V.G., Haq Q.M.I., Jyothsna P., Prakash J.; RT "Unique occurrence of Abutilon mosaic virus in India"; RL Unpublished. XX RN [2] RP 1-2637 RA Malathi V.G., Haq Q.M.I., Jyothsna P., Prakash J.; RT ; RL Submitted (07-NOV-2010) to the EMBL/GenBank/DDBJ databases. RL Advanced Centre for Plant Virology, Indian Agricultural Research Institute, RL Pusa Campus, New Delhi, Delhi 110012, India XX FH Key Location/Qualifiers FH FT source 1. .2637 FT /organism="Abutilon mosaic virus" FT /segment="DNA-A" FT /host="Abutilon" FT /strain="IN-Udg-JIX12-2010" FT /mol_type="genomic DNA" FT /country="India:Udagamandalam(Ooty)" FT /collected_by="VG Malathi" FT /collection_date="27-Apr-2010" FT /db_xref="taxon:10815" FT gene 202. .957 FT /gene="AV1" FT CDS 202. .957 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /protein_id="ADU54610.1" FT /translation="MPKRDLPWRSMPGTSKTSRNANYSPRARTGPRVDKASEWVHRPMY FT RKPRIYRTLRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNDITHRVGKRF FT CVKSVYILGKIWMDENIKLQNHTNSVMFWLVRDRRPYGTPMDFGHVFNMFDNEPSTATV FT KNDLRDRYQVMHKFYGKVTGGQYASNEQALVKRFWKVNNHVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSLVN" FT gene complement(535. .825) FT /gene="AC5" FT CDS complement(535. .825) FT /codon_start=1 FT /gene="AC5" FT /product="unknown" FT /protein_id="ADU54615.1" FT /translation="MIVDHMIVDLPETLDECLFIAGILSTCDLAIELMHDLVTIAEIVL FT HSGSTGLVVEHVEHMTKIHGRAIRSTVSDQPEHDTVRVVLELDVLVHPDLP" FT gene complement(954. .1352) FT /gene="AC3" FT CDS complement(954. .1352) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancing protein" FT /protein_id="ADU54613.1" FT /translation="MDSRTGELITVHQAENGVYTWEIQNPLYFRIYKVEDPLYTRTRIY FT HVQIRFNHNLRRALHLHKAYLNFQVWTTSMTASGSNYLARFRRLVNMYLDQLGVITINN FT VIRAVQFTTDRTYVNYVLENHSIKFKFY" FT gene complement(1099. .1488) FT /gene="AC2" FT CDS complement(1099. .1488) FT /codon_start=1 FT /gene="AC2" FT /product="transcription activator protein" FT /protein_id="ADU54612.1" FT /translation="MRSSSPSHPPSIRKAHRQAKRRAVRRRRIDLQCGCSIYFHIDCAG FT HGFTHRGTHHCTSGGEWRVYLGDTKSPVFQDIQSRGPTIHQNEDIPCANKVQPQPEESV FT ASPQSLPELPSLDDIDDSFWVKLFS" FT gene complement(1400. .2485) FT /gene="AC1" FT CDS complement(1400. .2485) FT /codon_start=1 FT /gene="AC1" FT /product="replication initiation protein" FT /protein_id="ADU54611.1" FT /translation="MPPQKKFRIQAKNYFITYPQCSLNKEEALSQLLNLETAVNKKFIK FT ICRELHENGEPHLHVLIQFEGKYRCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYI FT DKDGDTAEWGEFQIDGRSARGGQQTANDSYAKALNAGNVQSALNILKEEQPKDYVLQNH FT NIRSNLERIFAKAPEPWVPPFPLSSFTAVPENMQEWADDYFGSGSAARPYRPLSLIVEG FT DSRTGKTMWARALGPHNYLSGHLDFNGRVYSNEVRYNVIDDVTPQYLKLKHWKELLGAQ FT KDWQSNCKYGKPVQIKGGIPAIVLCNPGEGSSYKEYLDKEENTGLRNWTLKNAIFITLT FT SPLYQEGTQASQEEGRQATED" FT gene complement(2071. .2328) FT /gene="AC4" FT CDS complement(2071. .2328) FT /codon_start=1 FT /gene="AC4" FT /product="PTGS suppressor" FT /protein_id="ADU54614.1" FT /translation="MGSLISMCSYNSKANTDARITDSSIWSPQPGQHISIQTYRELNPA FT PTSSPTLTRTVIQLNGENSRSTADLLGEANRLLMIHMPRR" XX SQ Sequence 2637 BP; 643 A; 608 C; 614 G; 772 T; 0 other; hq588901 Length: 2637 28-JAN-2011 Type: N Check: 5202 .. 1 accggatggc cgcgcgtccc ccctggtgcc gtacactctc gcgcgctttt 51 tcaacctttt atttagaata aaaggtagtc cctggcgcat cgtccaatca 101 taatgcgcct gaccagtcaa tataaattga acaacttggg cgttaagttg 151 ttgggttttc tataaatgaa aagcccattg gcccacgagc tttaactcaa 201 aatgcctaag cgcgatctcc catggcgatc aatgcctggt acatcaaaga 251 ccagccgcaa cgctaattat tctcctcgtg ctcgtactgg gccaagagtt 301 gacaaggcct ctgaatgggt gcacaggccc atgtacagga agcccaggat 351 ctaccgaacg ctgaggacgc ccgatgtgcc cagaggctgt gaagggcctt 401 gtaaggtcca gtcgtatgaa cagcgtcacg acatctcaca tgttggcaag 451 gtaatgtgca tctctgatgt gacacgtggt aatgacatta cccaccgtgt 501 gggtaagcgt ttctgtgtca agtctgtgta tattttaggg aagatctgga 551 tggacgagaa catcaagctc cagaaccaca cgaacagtgt catgttctgg 601 ttggtcagag accgtagacc gtatggcacg cccatggatt ttggtcatgt 651 gttcaacatg ttcgacaacg agcccagtac tgccactgtg aagaacgatc 701 tccgcgatcg ttaccaggtc atgcataagt tctatggcaa ggtcacaggt 751 ggacagtatg ccagcaatga acaggcactc gtcaagcgtt tctggaaggt 801 caacaatcat gtggtctaca atcatcaaga ggctggcaag tacgagaatc 851 acacggagaa cgctctacta ttgtatatgg catgtactca tgcttctaac 901 cccgtttatg caactctaaa gatccgaatc tatttctatg attcgctcgt 951 taattaataa aatttgaatt ttattgaatg attttccagt acatagttta 1001 catacgttct gtctgtcgta aactgaacag ctctaattac attgttaatg 1051 gtaatcacgc ctaactgatc taagtacatg ttgactaaac gcctaaatct 1101 agctaaataa tttgacccag aagctgtcat cgatgtcgtc caaacttgga 1151 agttcaggta agctttgtgg agatgcaacg ctctcctcag gttgtggttg 1201 aaccttattt gcacatggta tatcctcgtt ctggtgtata gtgggtcctc 1251 tactttgtat atcctgaaat acaggggatt ttgtatctcc caggtataca 1301 cgccattctc cgcctgatgt acagtgatga gttcccctgt gcgtgaatcc 1351 atgtcctgca cagtctatgt ggaagtagat ggagcacccg cactgcagat 1401 caatcctccg tcgcctgacg gccctcctct tggcttgcct gtgtgccttc 1451 ctgatagagg ggggatgtga gggtgatgaa gatcgcattc ttgagagtcc 1501 agttcctgag acctgtattt tcctctttgt ccaggtactc tttatagctg 1551 gaaccctcac caggattgca aagcacgatt gctgggattc ctcctttaat 1601 ttgaaccggc ttgccgtatt tgcaatttga ttgccagtct ttctgggccc 1651 ccagcaattc tttccaatgc tttagcttta gatattgcgg tgtgacgtca 1701 tcaatgacgt tatacctcac ttcatttgaa tagacgcgac cattgaagtc 1751 caggtgtcca ctgagatagt tatgtgggcc taacgcacgt gcccacatcg 1801 tcttccctgt ccttgaatca ccttcgacta tgagacttaa tggtctatat 1851 ggccgcgcag cggaaccact cccaaaataa tcatccgccc actcctgcat 1901 gttttcgggg acggcagtga aagatgatag gggaaacgga ggaacccatg 1951 gttccggagc ctttgcgaat attctctcga gattggagcg gatgttatga 2001 ttctgaagga cataatcttt tggctgttct tccttcagaa tgtttaaggc 2051 agattgaaca tttcctgcat tcaacgcctt ggcatatgaa tcattagcag 2101 tctgttggcc tcccctagca gatctgccgt cgatctggaa ttctccccat 2151 tcagctgtat caccgtcctt gtcaatgtag gacttgacgt cggagctgga 2201 tttagctccc tgtatgtttg gatggaaatg tgctgacctg gttggggaga 2251 ccagatcgaa gaatctgtta ttcgtgcatc ggtatttgcc ttcgaattgt 2301 atgagcacat ggagatgagg ctccccattt tcgtgaagct ctctacagat 2351 tttgatgaac ttcttgttca ctgctgtttc taggtttagt aattgggaaa 2401 gtgcctcctc tttattaaga gagcactggg gatatgtgat gaaataattt 2451 ttggcttgta ttctaaattt cttttgcggt ggcatttttg taataagaat 2501 ggttactcta gatagatgag gtgctccagt tgaggctcct caaaacttgc 2551 tcatgtaatt ggagcattgg agctctttat atactagaac tctcattaac 2601 ggatttgcaa cacgtggcgg ccatccgcta taatatt