Sequence of DPV Apple chlorotic leaf spot virus

Apple chlorotic leaf spot virus clone 8 movement protein gene, partial cds; and coat protein gene, complete cds.

ACC No: HQ670743

Dated: 2012-01-02 | Length: 802 | CRC: -1078387122

                
ID   HQ670743; SV 1; linear; genomic RNA; STD; VRL; 802 BP.
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AC   HQ670743;
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DT   02-JAN-2012 (Rel. 111, Created)
DT   02-JAN-2012 (Rel. 111, Last updated, Version 1)
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DE   Apple chlorotic leaf spot virus clone 8 movement protein gene, partial cds;
DE   and coat protein gene, complete cds.
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KW   .
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OS   Apple chlorotic leaf spot virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Tymovirales;
OC   Betaflexiviridae; Trichovirus.
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RN   [1]
RP   1-802
RA   Glasa M.;
RT   "Genetic diversity of Apple chlorotic leaf spot virus";
RL   Unpublished.
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RN   [2]
RP   1-802
RA   Glasa M.;
RT   ;
RL   Submitted (01-DEC-2010) to the INSDC.
RL   Plant Virology, Institute of Virology, Slovak Academy of Sciences,
RL   Dubravska cesta 9, Bratislava 84505, Slovakia
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FH   Key             Location/Qualifiers
FH
FT   source          1. .802
FT                   /organism="Apple chlorotic leaf spot virus"
FT                   /host="apple"
FT                   /isolate="LV-mBDz007"
FT                   /mol_type="genomic RNA"
FT                   /country="Latvia"
FT                   /clone="8"
FT                   /db_xref="taxon:12175"
FT   CDS             <1. .359
FT                   /codon_start=3
FT                   /product="movement protein"
FT                   /protein_id="AEB21309.1"
FT                   /translation="REFQFARQDKAKEDGSSSEFTAKSGRRSESVPGRRRQTPSWKDRG
FT                   NPGTDTGVHLREHSNSRDVRADGVPGPSGGGEINGGSEGHRGLQPEGGGQYDQSIQDYL
FT                   FGSEHQQHDFPPGV"
FT   CDS             43. .624
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /protein_id="AEB21310.1"
FT                   /translation="MAAVLNLQLKVDADLKAFLAAEGRPLHGKTGAILEQTLESIFANI
FT                   AIQGTSEQTEFLDLVVEVKSMEDQKVIGAYNLKEVVNMIKAFKTTSSDPNISNMTFRQV
FT                   CEAFAPEARNGLVKLKYKGVFTNLFTTMPEVGSKYPELMFDFNKGLNMFIMNKAQQKVI
FT                   TNMNRRLLQTEFAKSENEAKLSSVTTDLCI"
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SQ   Sequence 802 BP; 259 A; 143 C; 196 G; 204 T; 0 other;

hq670743 Length: 802  02-JAN-2012  Type: N  Check: 9762  ..

       1  caagagagtt tcagtttgct cgacaggaca aggcgaagga ggatggcagc
      51  agttctgaat ttacagctaa aagtggacgc agatctgaaa gcgttcctgg
     101  ccgcagaagg cagacccctt catggaaaga caggggcaat cctggaacag
     151  acactggagt ccatcttcgc gaacatagca attcaaggga cgtcagagca
     201  gacggagttc ctggacctag tggtggaggt gaaatcaatg gaggatcaga
     251  aggtcatagg ggcctacaac ctgaaggagg tggtcaatat gatcaaagca
     301  ttcaagacta cctcttcgga tccgaacatc agcaacatga ctttccgcca
     351  ggtgtgtgag gctttcgcac cggaggcaag gaacgggttg gtaaaattga
     401  agtacaaagg ggttttcact aaccttttta caaccatgcc agaagttgga
     451  agtaaatacc cggagttgat gtttgacttt aataagggcc ttaacatgtt
     501  catcatgaac aaggcccaac aaaaagttat aactaatatg aaccggcgcc
     551  ttttacaaac tgaatttgca aaaagtgaga atgaggcgaa gctctcatct
     601  gttacaactg atctttgcat ttagtttgtt taagaggttt ggcctgataa
     651  ataaaataaa caaatagtat gttgtgtgtt taaatatgtt tgcattaagt
     701  atatttgcat tgaataaaca aactcttgaa cccatgaaag agtataaaga
     751  gtcatggtat ttgattggag tgtttagact tataataaat agcctgtaga
     801  ct