Sequence of DPV Velvet tobacco mottle virus
Velvet tobacco mottle virus isolate V2 RNA dependent RNA polymerase gene, complete cds.
ACC No: HQ680390
Dated: 2011-05-10 | Length: 1647 | CRC: 867714755
ID HQ680390; SV 1; linear; genomic RNA; STD; VRL; 1647 BP.
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AC HQ680390;
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DT 10-MAY-2011 (Rel. 108, Created)
DT 10-MAY-2011 (Rel. 108, Last updated, Version 1)
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DE Velvet tobacco mottle virus isolate V2 RNA dependent RNA polymerase gene,
DE complete cds.
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KW .
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OS Velvet tobacco mottle virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Sobemovirus.
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RN [1]
RP 1-1647
RA Arthur K.R., Randles J.W.;
RT "Sequence variation in the VTMoV RdRp";
RL Unpublished.
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RN [2]
RP 1-1647
RA Arthur K.R., Randles J.W.;
RT ;
RL Submitted (02-DEC-2010) to the EMBL/GenBank/DDBJ databases.
RL School of Agriculture, Food and Wine, University of Adelaide, Waite Rd,
RL Adelaide, SA 5064, Australia
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FH Key Location/Qualifiers
FH
FT source 1. .1647
FT /organism="Velvet tobacco mottle virus"
FT /host="Nicotiana velutina"
FT /isolate="V2"
FT /mol_type="genomic RNA"
FT /country="Australia"
FT /collected_by="John Randles"
FT /collection_date="Jul-1979"
FT /db_xref="taxon:12473"
FT CDS 1. .1647
FT /codon_start=1
FT /product="RNA dependent RNA polymerase"
FT /note="P2b; RdRp"
FT /protein_id="AEE36654.1"
FT /translation="MGFNYVGVSSCKFREGSKHAARGAISSAEQVFPELKQYGWPERGS
FT KAEFDSLLLQASRFRRTSCPEQTERKCEVLAEKYPKSRAHRCFRRENFCQRQLLREQIE
FT ATTTSPEINDKASPGSPWSRLEKTNGELISRFEDLLIEAVLRRVLLLASTPTSEILCMS
FT ASDLVRANLVDPVRLFVKQEPHTKKKLNERRFRLISSVSIVDQIIERLLFGPQNRLEIA
FT LWHQIPSKPGMGLSARTQADLLWNELFAKSEIAPAAEADISGFDWSVQEWELWADLSMR
FT ISLCEDMHDGLRRLMVNRYRCFMLSCFQLSNGELYEQVEPGLMKSGSYCTSSSNSRIRC
FT LMGYLIGAPWIIAMGDDSVEGYVRDAKGKYEELGHTCKEYELCDVDSDGALRSVNFCSH
FT LISRNKFWLTSWPKTLYRFLDSPSENFHDLERELGSCPKWAKIKDYCCQVGLVPDKTYW
FT EEDHPADYVEETHQEPGQADDTGNLAERADFCSVPTTETPKVDAARAEFYSYGPNGWSC
FT DIPEATHVNQWPLWGYSSSFGGGFGSPIRDY"
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SQ Sequence 1647 BP; 424 A; 375 C; 431 G; 417 T; 0 other;
hq680390 Length: 1647 10-MAY-2011 Type: N Check: 7685 ..
1 atgggattca actatgttgg agtctcgtct tgcaagttta gagagggctc
51 taagcacgct gctcgcggag caatcagttc tgctgagcaa gttttcccag
101 aactcaaaca gtatggttgg ccagaaagag gctctaaagc cgagttcgat
151 tccctcctcc tccaagccag ccgtttccgg agaacctcct gtccagagca
201 aaccgagcgt aaatgcgaag tcctcgctga gaagtacccc aaaagtagag
251 cccaccgttg cttcaggaga gaaaacttct gtcaacgcca gctcctcagg
301 gaacaaatcg aagcgacgac gacgtcgccg gaaatcaacg acaaagccag
351 ccccggctcc ccctggtcaa gacttgaaaa gaccaatggt gagctcatct
401 cccgtttcga agacctctta attgaggcag tgttgaggcg agttttattg
451 cttgcctcca ctccaaccag tgagatttta tgcatgtctg cttcagatct
501 cgttagagct aacttagtgg atcctgtgcg attgttcgtc aagcaggaac
551 cccatacgaa gaagaagctg aatgagcgtc gctttaggct tatttcgtct
601 gtgtctatag ttgatcagat aatcgagaga ttattgtttg gtcctcagaa
651 caggcttgag atagccttat ggcatcagat accttccaaa cctggaatgg
701 gactgagcgc tcgtacgcaa gctgatttgt tgtggaatga gttattcgca
751 aagagcgaga ttgcccctgc ggccgaggct gacatttcag gatttgactg
801 gtctgtgcag gaatgggagt tatgggccga tctgagcatg aggatttctt
851 tgtgcgaaga tatgcatgat ggtctacgga ggttgatggt taacagatac
901 cgctgcttta tgctctcttg cttccaattg tcgaatgggg aattgtatga
951 acaagttgag cctggactca tgaagtctgg ttcctactgc acttcctctt
1001 ccaactccag aatcaggtgc ctaatgggct atctaattgg agccccctgg
1051 ataatagcca tgggggatga ttctgttgag ggttatgtga gagacgcgaa
1101 aggcaagtat gaggaattag gacacacttg taaggaatac gagttgtgtg
1151 atgttgattc agacggcgcg ttgagatctg tgaacttttg ttcacatttg
1201 atttcccgca acaagttttg gctcacaagc tggcctaaaa ccttgtacag
1251 gttcctagac tctccctctg aaaattttca tgatcttgaa agggaactag
1301 gctcatgtcc caagtgggcc aagataaagg attattgttg tcaggtagga
1351 ctggtccctg acaaaacata ttgggaagaa gatcaccctg ctgactatgt
1401 cgaagaaact caccaagaac caggtcaagc agatgataca ggcaaccttg
1451 ccgaaagagc agacttctgc tcggtcccga cgacggagac gccgaaggtc
1501 gacgcagcaa gggcagagtt ctacagttat ggccccaatg gctggagctg
1551 tgatataccg gaagcgaccc atgttaatca atggccgctc tggggttaca
1601 gttcgtcatt cggaggtggt tttggtagtc caatccggga ctactaa