Sequence of DPV Sweet potato chlorotic stunt virus

Sweet potato chlorotic stunt virus isolate EL p6 and p6-HSP genes, complete cds.

ACC No: HQ847524

Dated: 2011-09-19 | Length: 974 | CRC: -1476109445

                
ID   HQ847524; SV 1; linear; genomic RNA; STD; VRL; 974 BP.
XX
AC   HQ847524;
XX
DT   19-SEP-2011 (Rel. 110, Created)
DT   19-SEP-2011 (Rel. 110, Last updated, Version 1)
XX
DE   Sweet potato chlorotic stunt virus isolate EL p6 and p6-HSP genes, complete
DE   cds.
XX
KW   .
XX
OS   Sweet potato chlorotic stunt virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae;
OC   Crinivirus.
XX
RN   [1]
RP   1-974
RX   PUBMED; 21262288.
RA   Cuellar W.J., Cruzado R.K., Fuentes S., Untiveros M., Soto M., Kreuze J.F.;
RT   "Sequence characterization of a Peruvian isolate of Sweet potato chlorotic
RT   stunt virus: further variability and a model for p22 acquisition";
RL   Virus Res. 157(1):111-115(2011).
XX
RN   [2]
RP   1-974
RA   Cuellar W.J., Cruzado R.K., Fuentes S., Untiveros M., Soto M., Kreuze J.F.;
RT   ;
RL   Submitted (04-JAN-2011) to the INSDC.
RL   Integrated Crop Management Division, International Potato Center (CIP), Av.
RL   La Molina 1895, Lima L12, Peru
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .974
FT                   /organism="Sweet potato chlorotic stunt virus"
FT                   /host="Ipomoea batatas"
FT                   /strain="WA"
FT                   /isolate="EL"
FT                   /mol_type="genomic RNA"
FT                   /country="Argentina"
FT                   /db_xref="taxon:81931"
FT   CDS             23. .172
FT                   /codon_start=1
FT                   /product="p6"
FT                   /protein_id="AEO37513.1"
FT                   /translation="MTQSIRESMGLCNPRTRISVTYWMQSDCPSYLLLFCVYKSKTQKY
FT                   IFSP"
FT   CDS             488. .646
FT                   /codon_start=1
FT                   /product="p6-HSP"
FT                   /protein_id="AEO37514.1"
FT                   /translation="MVCHIFKFGFSLYFSFLEYCLDYMLIVCFLLSAYSMFCDYLFSLS
FT                   INLLNIL"
XX
SQ   Sequence 974 BP; 241 A; 149 C; 156 G; 428 T; 0 other;

hq847524 Length: 974  19-SEP-2011  Type: N  Check: 7333  ..

       1  tgactcgcat tttttgcgat gaatgactca atctattcgg gagtctatgg
      51  gactttgtaa tccgagaact cgcatcagtg tgacgtattg gatgcaaagt
     101  gactgcccgt catatctttt acttttctgc gtttataaat caaaaaccca
     151  aaaatatatc ttctctccat aagagagtac ctaatataat acctagctca
     201  gcccactaaa cgaaacagaa tattttgagc gataaaaaag gtaacaccaa
     251  tgggccggta gttatcgaag ttttgatggg tttattcaaa cccatcctcc
     301  cttataaggg gtcttacgat acccctatag cccccgttat ctagtaaata
     351  cgtatatatt gtgaatagtt ttacttttgt tgatagttct tcttcagatt
     401  ttatcttaat gttgatattg tgattactgt ttattaggaa gtaatttctt
     451  attagatgtt ttacagtttt atcgttggtg tttatatatg gtatgtcata
     501  tttttaagtt tggattttcc ctttattttt cttttttaga atattgtcta
     551  gactatatgt taatagtttg ttttttgtta tcagcatata gtatgttttg
     601  cgattacttg ttttctttaa gtattaactt attaaatata ttatgatttt
     651  ctcttttgta ttttttcccg gtcgttttaa tatttttatt aggttgttat
     701  cttgatgatt atatgttaga gtatttgtta gactatgtag tatagtcttc
     751  ttttgagtgt ccatctgtta gttttctttc ttgattctat tgacttcgtt
     801  gtttatgttt atactgttag ttttgaagct cacatacgtt tacttctctt
     851  caattgttta gttaatatat tttgagtatt ctttaattct ttcattccct
     901  ttttcttctt ttgtattatg gaggctaaag ctggtttaga ctttggtacc
     951  accttcagca ctatctccgc gtac