Sequence of DPV Cotton leaf curl Multan betasatellite

Cotton leaf curl Multan betasatellite isolate In:Fazilka:2004, complete sequence.

ACC No: JF502374

Dated: 2012-05-04 | Length: 1353 | CRC: -778758433

                
ID   JF502374; SV 1; circular; genomic DNA; STD; VRL; 1353 BP.
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AC   JF502374;
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DT   28-FEB-2012 (Rel. 111, Created)
DT   04-MAY-2012 (Rel. 112, Last updated, Version 2)
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DE   Cotton leaf curl Multan betasatellite isolate In:Fazilka:2004, complete
DE   sequence.
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KW   .
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OS   Cotton leaf curl Multan betasatellite
OC   Viruses; Satellites; Satellite Nucleic Acids;
OC   Single stranded DNA satellites; Betasatellites.
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RN   [1]
RP   1-1353
RX   PUBMED; 22307170.
RA   Rajagopalan P.A., Naik A., Katturi P., Kurulekar M., Kankanallu R.S.,
RA   Anandalakshmi R.;
RT   "Dominance of resistance-breaking cotton leaf curl Burewala virus (CLCuBuV)
RT   in northwestern India";
RL   Arch. Virol. 157(5):855-868(2012).
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RN   [2]
RP   1-1353
RA   Katturi P., Naik A.S., Rajagopalan P.A., Kankanallu R.S., Anandalakshmi R.;
RT   ;
RL   Submitted (06-MAR-2011) to the INSDC.
RL   Plant-Virus Interactions Lab, Maharashtra Hybrid Seeds Co Ltd, Jalna -
RL   Aurangabad road, Jalna, Maharashtra 431 203, India
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FH   Key             Location/Qualifiers
FH
FT   source          1. .1353
FT                   /organism="Cotton leaf curl Multan betasatellite"
FT                   /host="cotton"
FT                   /isolate="In:Fazilka:2004"
FT                   /mol_type="genomic DNA"
FT                   /country="India"
FT                   /collection_date="Sep-2004"
FT                   /note="PCR_primers=fwd_name: Beta01 Briddon et al 2002,
FT                   rev_name: Beta02 Briddon et al 2002"
FT                   /db_xref="taxon:306025"
FT   gene            complement(195. .551)
FT                   /gene="beta C1"
FT   CDS             complement(195. .551)
FT                   /codon_start=1
FT                   /gene="beta C1"
FT                   /product="beta C1 protein"
FT                   /protein_id="AFB81474.1"
FT                   /translation="MTTSGTNKEGVRFIVDVRIMENMKIFIHMRILSTKSPSLIKFEGI
FT                   VQYTYEDIHVSPDFNAFEGSTIANFLFAYNGAKIETIEIEDIGHRPGILVLENQEILGM
FT                   DVIEPYIFNKKFTV"
XX
SQ   Sequence 1353 BP; 381 A; 234 C; 325 G; 413 T; 0 other;

jf502374 Length: 1353  04-MAY-2012  Type: N  Check: 6471  ..

       1  accgtgggcg agcggtgccc ggtggccgcg cagtgggtcc cactgcttgt
      51  ctcgactgga tttgacttct aatgggccaa tttaatgggc ttggaagtga
     101  ttgggccttt gaagatggcc ttttatggat tatgggtctg tttgttgttg
     151  gtgatatgtg tgttaaatat gcattgctgg tttgtggttg caatttaaac
     201  ggtgaacttc ttattgaata tgtatggttc gattacatcc attcccaata
     251  tctcttggtt ttccagtaca agtataccag gtctgtgacc tatatcttct
     301  atctcgatcg tctctatctt tgccccgttg tatgcgaata ggaaattcgc
     351  tatggtgctc ccttcaaaag cgttgaagtc gggtgaaacg tgtatgtctt
     401  cgtacgtgta ctggacgatc ccttcaaact tgattagcga tggtgacttt
     451  gtggatagta tcctcatgtg aatgaagatc ttcatattct ccatgatgcg
     501  aacgtcgact atgaacctga ctccctcctt gtttgttccg ctcgttgtca
     551  tttctgctta tttgatggaa ttgtttagtg tgcattcttt tatagactta
     601  atgaacagat attttgtgta gttgtgtggt tgtgagtgat ttattattat
     651  gtgattgtcc attaaaggga taaagtgatg atggagacgt attacacgtg
     701  ttgtcatgtt ggtttgaaac ttttatacat gggtttggtc catatcctct
     751  tatatatacg gatatagaac ggatgagaaa aagggaaacg gaactgaaga
     801  gaaaacacaa gagaaaaaag caagggtata tattatatta aaaaattggg
     851  agcgcagcga atcgaaacag gaaaacccaa ggaaagagaa aaaataaaaa
     901  gtaaagagaa aaaaaataaa ttcgaaaacg ttatcgtttg agagtaataa
     951  aaaaaagaaa aaacaaaaac atatccgaaa acgttgtcgt ttgaaggtga
    1001  ctgtgtggtt ttaccattta ctgtgtggta aatggtaagt gattgaagaa
    1051  tagttaaaaa atggagacac cgataggtaa attgtacccc aatatattgg
    1101  ggtacaattg gggactcata aattaccttt cctaaaatac ccctatttct
    1151  gtgtctggaa ggtgcgtgga agtgcgctga aaaaggtgtt cttctctcac
    1201  ctaaaacccg ccggaacgcc aaaactggct gttgccggca tcaatttacg
    1251  acccgggggg cggtgtgtac ccctgggagg gtaggtacca ctacgctacg
    1301  ctacgcagca gccttagcta cgccggagct tagctcgccc acgttttaat
    1351  att