Sequence of DPV Bean golden mosaic virus
Bean golden mosaic virus isolate BgV03A.1.C14 segment DNA-A, complete sequence.
ACC No: JF694450
Dated: 2012-03-25 | Length: 2616 | CRC: 632314518
ID JF694450; SV 1; circular; genomic DNA; STD; VRL; 2616 BP. XX AC JF694450; XX DT 02-JAN-2012 (Rel. 111, Created) DT 25-MAR-2012 (Rel. 112, Last updated, Version 2) XX DE Bean golden mosaic virus isolate BgV03A.1.C14 segment DNA-A, complete DE sequence. XX KW . XX OS Bean golden mosaic virus OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2616 RX PUBMED; 22397740. RA Wyant P.S., Strohmeier S., Schafer B., Krenz B., Assuncao I.P., Lima G.S., RA Jeske H.; RT "Circular DNA genomics (circomics) exemplified for geminiviruses in bean RT crops and weeds of northeastern Brazil"; RL Virology 427(2):151-157(2012). XX RN [2] RP 1-2616 RA Wyant P.S., Strohmeier S., Schaefer B., Krenz B., Assuncao I.P., RA Lima G.S.A., Jeske H.; RT ; RL Submitted (15-MAR-2011) to the INSDC. RL Molecular Biology and Plant Virology, University of Stuttgart, RL Pfaffenwaldring 57, Stuttgart, Baden-Wurttenberg 70550, Germany XX FH Key Location/Qualifiers FH FT source 1. .2616 FT /organism="Bean golden mosaic virus" FT /segment="DNA-A" FT /host="Phaseolus sp." FT /isolate="BgV03A.1.C14" FT /mol_type="genomic DNA" FT /country="Brazil:Alagoas" FT /db_xref="taxon:10839" FT gene 200. .955 FT /gene="AV1" FT CDS 200. .955 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:G9CLR6" FT /db_xref="UniProtKB/TrEMBL:G9CLR6" FT /protein_id="AEI91321.1" FT /translation="MVKRDAPWRHMAGTAKISRSTNYSPRSGNGSRYNKAAEWVNRPMY FT RKPRIYRTLRGPDVPRGCEGPCKVQSYEQRHDVSHVGKVMCVSDVTRGNGITHRVGKRF FT CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV FT KNDLRDRFQVMHKFYGKVTGGQYASNEQALVKRFWKVNNYVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSITN" FT gene complement(952. .1350) FT /gene="AC3" FT CDS complement(952. .1350) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer" FT /db_xref="UniProtKB/TrEMBL:G9CLT7" FT /protein_id="AEI91324.1" FT /translation="MDSRTGERITARQAENGVYIWEISNPLYFKMYNVEDPLHTTTRIY FT HIQIRFNHNLRNKLGLHKAFLNFQVWTISLQASGTTYLNRFKYLVLLYLDRIGVISLNN FT IIRAVRFATDKSYVNYVIENHEIKYKFY" FT gene complement(1097. .1486) FT /gene="AC2" FT CDS complement(1097. .1486) FT /codon_start=1 FT /gene="AC2" FT /product="transcriptional regulator" FT /db_xref="UniProtKB/TrEMBL:G9CLR3" FT /protein_id="AEI91323.1" FT /translation="MRNSSSSTPPSIKVQHRAAKKRAIRRRRVDLECGCTIYVHINCSG FT HGFTHRGTHHCTSSREWRVYLGDIKSPLFQDVQRRGSTSHNDQNIPHTNTVQPQPQEQT FT GSTQGFPEFPSLDDISSSFWDDIFK" FT gene complement(1398. .2483) FT /gene="AC1" FT CDS complement(1398. .2483) FT /codon_start=1 FT /gene="AC1" FT /product="replication associated protein" FT /db_xref="UniProtKB/TrEMBL:G9CLT4" FT /protein_id="AEI91322.1" FT /translation="MPPPKRFKISAKNYFLTFPQCSITKECALEQLQHIQTPVNKKYIR FT ICKELHDNGEPHLHALIQFEGKFQCTNCRFFDLKHPITSSVSHANIQSAKSSSDVKSYI FT EKDGDYIEWGAFQIDGRSARGGQKTGNDAASEALNASSKEEAMQIIKEKLPEKFLFQYH FT NLSSNLDRIFTPAPEPWSPPFHLSSFTNVPKEMQEWADDYFGRGAAARPERPISIIVEG FT DSRTGKTMWARALGSHNYLSGHLDFNSKVFSNHAEYNVIDDIAPHYLKLKHWKELIGAQ FT KDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKCFLDKEENAALKNWTLHNAKFIFLD FT SPLYQSSTQSCEETSNQTTSS" FT gene complement(2069. .2326) FT /gene="AC4" FT CDS complement(2069. .2326) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="UniProtKB/TrEMBL:G9CLT5" FT /protein_id="AEI91325.1" FT /translation="MGNHICMHLFNSKESSSARIADSSTSNIQSHLPSPMPIYRVQNHP FT LMSSPTSRRTVITSNGVLFKSTEDLLEEVRRQVMMQHQRH" XX SQ Sequence 2616 BP; 693 A; 513 C; 588 G; 822 T; 0 other; jf694450 Length: 2616 25-MAR-2012 Type: N Check: 9374 .. 1 accggatggc cgcccgattt ttttggggta catctcttat tgggcctcat 51 gggcctcctt ttaatttaaa ttaaagtaaa gttattggac tgtccaatca 101 ataccgttgt gtcgagccta tttatttttt ccaacttggc ccccaagttg 151 actaacggct ataaatttaa attaaaactc acaacctctt taactcaaaa 201 tggttaagcg cgatgcccca tggcgccaca tggcaggtac ggccaagatt 251 agccgctcga ccaattattc tccacgtagt ggaaatgggt cgaggtacaa 301 taaggccgct gagtgggtca acaggcccat gtacagaaag cccaggatat 351 atcgaactct acgcggccct gatgttccta gaggttgcga aggcccatgc 401 aaagtccagt cttatgaaca acgacatgat gtttctcatg ttggtaaggt 451 tatgtgtgta tccgacgtga caagaggtaa tggtattacc catcgtgtgg 501 gaaaacgttt ttgtgttaag tctgtttata ttttaggtaa gatatggatg 551 gacgagaata tcaagttgaa gaatcacacg aatagtgtga tgttttggtt 601 agtcagagat cgtagaccgt atggcactcc tatggacttt ggacaagttt 651 ttaatatgtt cgacaatgaa cccagtacag ctactgttaa gaacgatctt 701 cgtgatcgtt ttcaagttat gcataaattc tatggaaagg tgacaggtgg 751 acaatatgct agcaacgagc aggcattggt taaacgtttt tggaaggtga 801 ataattatgt agtgtacaac catcaagaag cagggaaata cgagaatcat 851 acggagaacg ctttattatt gtatatggca tgtactcatg cctcaaatcc 901 tgtgtatgct actctaaaaa ttcggatcta tttttatgat tcgatcacca 951 attaataaaa tttatatttt atttcatgat tctcaattac ataatttaca 1001 tatgatttgt ctgttgcgaa acgtacagct ctgataatat tgttaagcga 1051 aataacacct attctatcta aatataataa cactagatat ttaaatctat 1101 ttaaatatgt cgtcccagaa gcttgaagag atatcgtcca gacttggaaa 1151 ttcaggaaag ccttgtgtag acccagtttg ttcctgaggt tgtggttgaa 1201 ccgtatttgt atgtggtata ttctggtcgt tgtgtgaagt ggatcctcta 1251 cgttgtacat cttgaaataa aggggatttg atatctccca aatatacacg 1301 ccattctctg cttgacgtgc agtgatgcgt tcccctgtgc gtgaatccat 1351 gtcccgagca atttatgtgc acgtaaattg tgcagccgca ctctaaatca 1401 actcgacgtc gtctgattgc tcgtttcttc gcagctctgt gttgaacttt 1451 gatagagggg ggagtcgagg aagatgaatt tcgcattatg gagtgtccag 1501 tttttgagag ctgcgttttc ctctttgtcg aggaaacatt tataactggc 1551 cccttcacct ggattgcaaa gcacgattga tgggattcca cctttaattt 1601 gaacgggttt cccgtatttg cagtttgatt gccagtcctt ttgagcccca 1651 atcaattcct tccagtgctt taactttaga tagtgcggtg cgatgtcatc 1701 aatgacgtta tactcagcat gatttgaaaa cacctttgag ttgaaatcca 1751 ggtgaccact tagataattg tgggacccta atgcacgtgc ccacattgtc 1801 ttccccgttc gtgaatcacc ttctacgatg atactaatag gtctttccgg 1851 ccgcgcagcg gcacctctcc cgaaataatc atcagcccac tcttgcatct 1901 ccttgggcac attagtgaat gaggagaggt gaaacggagg agaccacggc 1951 tccggagctg gtgtaaaaat cctatccaga ttgctagaga ggttatgata 2001 ttggaagaga aacttttccg gcagtttctc ttttattatt tgcatggctt 2051 cttcttttga agaagcattc agtgcctctg atgctgcatc attacctgtc 2101 ttctgacctc ctctagcaga tcttccgtcg atttgaaaag caccccattc 2151 gatgtaatca ccgtccttct cgatgtagga cttgacatca gaggatgatt 2201 ttgcactctg tatattggca tgggagacgg aagatgtgat tggatgtttg 2251 aggtcgaaga atctgcaatt cgtgcactgg aactttcctt cgaattgaat 2301 aagtgcatgc agatgtggtt ccccattatc gtgcaattct ttgcagattc 2351 tgatgtattt cttgttgacg ggtgtttgta tgtgttgaag ttgctcaagt 2401 gcacactctt ttgtaatgga gcattgtgga aatgtgagga aataattctt 2451 agcgcttatc ttgaaacgct tcggtggtgg catacttgta aataagtgtg 2501 tgtaccccga ttgagctctc gctcataagt ctctatgaat tggggtaaag 2551 gggacaatat atagtataag ttcctaaggg cttaagggac acgtgtaggc 2601 catccgttat aatatt