Sequence of DPV Blainvillea yellow spot virus
Blainvillea yellow spot virus isolate BgV06A.1.C80 segment DNA-A, complete sequence.
ACC No: JF694468
Dated: 2012-03-25 | Length: 2678 | CRC: -1943955784
ID JF694468; SV 1; circular; genomic DNA; STD; VRL; 2678 BP. XX AC JF694468; XX DT 02-JAN-2012 (Rel. 111, Created) DT 25-MAR-2012 (Rel. 112, Last updated, Version 2) XX DE Blainvillea yellow spot virus isolate BgV06A.1.C80 segment DNA-A, complete DE sequence. XX KW . XX OS Blainvillea yellow spot virus OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus; OC unclassified Begomovirus. XX RN [1] RP 1-2678 RX PUBMED; 22397740. RA Wyant P.S., Strohmeier S., Schafer B., Krenz B., Assuncao I.P., Lima G.S., RA Jeske H.; RT "Circular DNA genomics (circomics) exemplified for geminiviruses in bean RT crops and weeds of northeastern Brazil"; RL Virology 427(2):151-157(2012). XX RN [2] RP 1-2678 RA Wyant P.S., Strohmeier S., Schaefer B., Krenz B., Assuncao I.P., RA Lima G.S.A., Jeske H.; RT ; RL Submitted (15-MAR-2011) to the INSDC. RL Molecular Biology and Plant Virology, University of Stuttgart, RL Pfaffenwaldring 57, Stuttgart, Baden-Wurttenberg 70550, Germany XX FH Key Location/Qualifiers FH FT source 1. .2678 FT /organism="Blainvillea yellow spot virus" FT /segment="DNA-A" FT /host="Blainvillea rhomboidea" FT /isolate="BgV06A.1.C80" FT /mol_type="genomic DNA" FT /country="Brazil" FT /db_xref="taxon:536081" FT gene 234. .989 FT /gene="AV1" FT CDS 234. .989 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:G9CLX0" FT /db_xref="UniProtKB/TrEMBL:G9CLX0" FT /protein_id="AEI91375.1" FT /translation="MPKRDAPWRHMTGTSKISRSVNFSPRSSVGPRSNKANDWVNRPMY FT RKPKIYRMYRNPDVPRGCEGPCKVQSYEQRHDVSHVGKVMCVSDVTRGNGITHRVGKRF FT CVKSVYIIGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV FT KNDLRDRFQVMHKFYGKVTGGQYASNEQALVKRFWKVNNYVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSISN" FT gene complement(986. .1384) FT /gene="AC3" FT CDS complement(986. .1384) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer" FT /db_xref="UniProtKB/TrEMBL:G9CLX1" FT /protein_id="AEI91378.1" FT /translation="MDSRTGELITAPQAENGVYIWETPNPLYFKIYRVEDLRYTSTRVY FT HIQIRFNHNVRKALDLHKAYLNFQVWTTSLTASGVAYLSRFEYLVMLYLNRSGVISINN FT VIRAVRFATDKAYIHHVLEQHSIKFKIY" FT gene complement(1131. .1526) FT /gene="AC2" FT CDS complement(1131. .1526) FT /codon_start=1 FT /gene="AC2" FT /product="transcriptional regulator" FT /db_xref="UniProtKB/TrEMBL:G9CLX2" FT /protein_id="AEI91377.1" FT /translation="MRNSSSSTPPSIKAQHRAAKQRQRAIRRRRIDLSCGCSIFLHINC FT RGHGFTHRGTHHCTSGGEWRLYLGDTKSPLFQDIPSRGPEIHIDASIPHSDPVQPQRAE FT SVGSPQGLSELPSLDDFPDGFWSSVLK" FT gene complement(1447. .2523) FT /gene="AC1" FT CDS complement(1447. .2523) FT /codon_start=1 FT /gene="AC1" FT /product="replication associated protein" FT /db_xref="UniProtKB/TrEMBL:G9CLX3" FT /protein_id="AEI91376.1" FT /translation="MSKPQRFRIQSKNYFLTYPKCSITKEEALEQILALDTPTNKKYIR FT VCRELHENGEPHLHALLQFEGKFTCTNCRFFDLRHPRNSNVCHGKYESCRSSSDAKSYV FT EKDGDYIEWGNFQIDGRSARGGKQTANDSYAKALNTSSIEQALDIIKEEQPQHFFLQHH FT NIVANAQRIFKTVPEPWVSPFPLSSFTNVPEEMQAWADDYFGRSAAARPERPISIIIEG FT DSRTGKTMWARALGVHNYLSGHLDFNPKCYSNEAHYNIIDDVDPKYLKMKHWKELIGAQ FT KDWQSNCKYGKPVQIKGGIPCIVLCNPGEGASYKSFLDRPENTGLNNWTKHNAKFVFLN FT TPLYQSAAPSSETTSTCD" FT gene complement(2109. .2366) FT /gene="AC4" FT CDS complement(2109. .2366) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="UniProtKB/TrEMBL:G9CLX4" FT /protein_id="AEI91379.1" FT /translation="MGSLISMLCCNSKGSSRARIADSSIYDTQEIPMFVMASTNLVGHP FT PTPNHMLRRTEITSNGVIFRSTEDLLEEVNRQLTIHTQRR" XX SQ Sequence 2678 BP; 677 A; 560 C; 612 G; 828 T; 1 other; jf694468 Length: 2678 25-MAR-2012 Type: N Check: 2143 .. 1 acctgagggc cgccctccgg agactcccct tttgacgtgg cgctctctcc 51 tccgctggat tgtattatct tggagattgg gccggtctct tttgccccac 101 cttgctttaa tttaaagttg ttaggcccaa tcattttgcg tttcccgagc 151 ttagatatta ttaaagtctt gggcgccaag ttcgataaag gctataaatt 201 atatggtgac cactcatgtc actttaattc aaaatgccta agcgcgatgc 251 cccatggcgc catatgacag ggacgtccaa aattagccgg tccgttaatt 301 tctcacctcg ttcaagtgtt gggccaagat ccaacaaggc caatgattgg 351 gttaacaggc ctatgtacag gaagcccaag atatatcgga tgtacaggaa 401 ccccgatgtt ccaaggggtt gtgaagggcc ttgtaaagtc cagtcttatg 451 agcaacgtca tgatgtgtca catgttggca aggtgatgtg tgtgtcggac 501 gtgacacgcg gcaatggtat cacccatcgt gttgggaaac gtttctgtgt 551 taagtctgta tatattatag gtaagatatg gatggacgag aatatcaagt 601 tgaagaacca taccaacagt gttatgtttt ggttggtacg agaccgtaga 651 ccctatggaa cccctatgga ctttggccaa gtgtttaaca tgtttgacaa 701 tgagcctagt acggctactg ttaagaacga tcttcgtgat cgtttccaag 751 ttatgcacaa gttttatggc aaagtcactg gtggacagta tgcaagtaat 801 gaacaggcgc ttgttaagcg cttttggaag gtgaacaact atgtggtgta 851 caaccatcaa gaagctggga agtatgagaa tcacactgag aacgcattat 901 tattgtatat ggcatgtact catgcctcta atcctgtgta tgctacgtta 951 aagatacgga tctattttta cgattcgata tccaattaat aaattttgaa 1001 ctttattgaa tgttgttcaa gtacatgatg gatatatgct ttgtctgttg 1051 caaagcgaac tgctctaatt acattgttaa ttgaaattac acctgaacga 1101 ttgagataca acataactaa atactcaaat ctacttaagt acgctactcc 1151 agaagccgtc agggaagtcg tccagacttg gaagttcaga taagccttgt 1201 ggagatccaa cgctttccgc acgttgtggt tgaaccggat ctgaatgtgg 1251 tatactcgcg tcgatgtgta tctcaggtcc tctactcggt atatcttgaa 1301 atagagggga tttggtgtct cccagatata gacgccattc tccgcctgag 1351 gtgcagtgat gagttcccct gtgcgtgaat ccatgacctc tacagtttat 1401 atggagaaat atggaacagc cacacgatag atcaattcgt cttctcctaa 1451 tcgcacgttg acgttgtttc gctgctcggt gctgcgcttt gatagagggg 1501 ggtgttgagg aagacgaatt tcgcattgtg ctttgtccag ttatttaatc 1551 ctgtattttc gggtctgtct aggaagcttt tatagctggc cccctcgcca 1601 ggattgcaaa gcacgatgca tgggatacct cctttaattt gaactggttt 1651 accgtattta caatttgact gccagtcctt ttgggcccca attaactctt 1701 tccagtgttt catctttaaa tatttggggt ccacgtcatc aataatgttg 1751 tagtgtgctt cgttggaata gcacttaggg ttaaagtcta ggtgaccact 1801 taaataattg tggaccccta aagcacgtgc ccacatsgtc ttccctgttc 1851 gagaatcacc ttcaattatt atactaatag gtctctccgg ccgcgcagcg 1901 gcacttcttc cgaaataatc gtccgcccaa gcttgcatct cttctggcac 1951 gttagtgaat gatgataatg gaaacggaga aacccatggc tctggaactg 2001 ttttaaatat ccgttgagca tttgcaacta tgttgtgatg ttggaggaag 2051 aagtgttgtg gctgttcctc cttgattata tctagagcct gttctatgga 2101 cgatgtgttt aacgcctttg cgtatgaatc gttagctgtc tgtttacctc 2151 ctcgagcaga tcttccgtcg atctgaaaat taccccattc gatgtaatct 2201 ccgtccttct caacatatga tttggcgtcg gaggatgacc tacaagattc 2251 gtacttgcca tgacaaacat tggaatttct tgggtgtcgt agatcgaaga 2301 atctgcaatt cgtgcacgtg aacttccctt cgaattgcag caaagcatgg 2351 agatgaggct ccccattttc gtgtaactct ctacatacac gaatatattt 2401 cttgttcgtt ggtgtatcta atgcgagaat ctgttcgaga gcctcttctt 2451 tggttatgga acattttgga tatgtgagga aataattttt agactgtatt 2501 ctaaaacgct gaggtttgct catatttgaa cccagaagag tgtctccgga 2551 tggtgtctcc aactcccccc cttgaaactg ggcttatagt attggagact 2601 agagtcaata tatatgctag aagatatttg ggttagattg tggtccctac 2651 acccttgcgg ccctcagtat ataatatt