Sequence of DPV Blainvillea yellow spot virus

Blainvillea yellow spot virus isolate BgV06A.1.C80 segment DNA-A, complete sequence.

ACC No: JF694468

Dated: 2012-03-25 | Length: 2678 | CRC: -1943955784

                
ID   JF694468; SV 1; circular; genomic DNA; STD; VRL; 2678 BP.
XX
AC   JF694468;
XX
DT   02-JAN-2012 (Rel. 111, Created)
DT   25-MAR-2012 (Rel. 112, Last updated, Version 2)
XX
DE   Blainvillea yellow spot virus isolate BgV06A.1.C80 segment DNA-A, complete
DE   sequence.
XX
KW   .
XX
OS   Blainvillea yellow spot virus
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC   unclassified Begomovirus.
XX
RN   [1]
RP   1-2678
RX   PUBMED; 22397740.
RA   Wyant P.S., Strohmeier S., Schafer B., Krenz B., Assuncao I.P., Lima G.S.,
RA   Jeske H.;
RT   "Circular DNA genomics (circomics) exemplified for geminiviruses in bean
RT   crops and weeds of northeastern Brazil";
RL   Virology 427(2):151-157(2012).
XX
RN   [2]
RP   1-2678
RA   Wyant P.S., Strohmeier S., Schaefer B., Krenz B., Assuncao I.P.,
RA   Lima G.S.A., Jeske H.;
RT   ;
RL   Submitted (15-MAR-2011) to the INSDC.
RL   Molecular Biology and Plant Virology, University of Stuttgart,
RL   Pfaffenwaldring 57, Stuttgart, Baden-Wurttenberg 70550, Germany
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .2678
FT                   /organism="Blainvillea yellow spot virus"
FT                   /segment="DNA-A"
FT                   /host="Blainvillea rhomboidea"
FT                   /isolate="BgV06A.1.C80"
FT                   /mol_type="genomic DNA"
FT                   /country="Brazil"
FT                   /db_xref="taxon:536081"
FT   gene            234. .989
FT                   /gene="AV1"
FT   CDS             234. .989
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:G9CLX0"
FT                   /db_xref="UniProtKB/TrEMBL:G9CLX0"
FT                   /protein_id="AEI91375.1"
FT                   /translation="MPKRDAPWRHMTGTSKISRSVNFSPRSSVGPRSNKANDWVNRPMY
FT                   RKPKIYRMYRNPDVPRGCEGPCKVQSYEQRHDVSHVGKVMCVSDVTRGNGITHRVGKRF
FT                   CVKSVYIIGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV
FT                   KNDLRDRFQVMHKFYGKVTGGQYASNEQALVKRFWKVNNYVVYNHQEAGKYENHTENAL
FT                   LLYMACTHASNPVYATLKIRIYFYDSISN"
FT   gene            complement(986. .1384)
FT                   /gene="AC3"
FT   CDS             complement(986. .1384)
FT                   /codon_start=1
FT                   /gene="AC3"
FT                   /product="replication enhancer"
FT                   /db_xref="UniProtKB/TrEMBL:G9CLX1"
FT                   /protein_id="AEI91378.1"
FT                   /translation="MDSRTGELITAPQAENGVYIWETPNPLYFKIYRVEDLRYTSTRVY
FT                   HIQIRFNHNVRKALDLHKAYLNFQVWTTSLTASGVAYLSRFEYLVMLYLNRSGVISINN
FT                   VIRAVRFATDKAYIHHVLEQHSIKFKIY"
FT   gene            complement(1131. .1526)
FT                   /gene="AC2"
FT   CDS             complement(1131. .1526)
FT                   /codon_start=1
FT                   /gene="AC2"
FT                   /product="transcriptional regulator"
FT                   /db_xref="UniProtKB/TrEMBL:G9CLX2"
FT                   /protein_id="AEI91377.1"
FT                   /translation="MRNSSSSTPPSIKAQHRAAKQRQRAIRRRRIDLSCGCSIFLHINC
FT                   RGHGFTHRGTHHCTSGGEWRLYLGDTKSPLFQDIPSRGPEIHIDASIPHSDPVQPQRAE
FT                   SVGSPQGLSELPSLDDFPDGFWSSVLK"
FT   gene            complement(1447. .2523)
FT                   /gene="AC1"
FT   CDS             complement(1447. .2523)
FT                   /codon_start=1
FT                   /gene="AC1"
FT                   /product="replication associated protein"
FT                   /db_xref="UniProtKB/TrEMBL:G9CLX3"
FT                   /protein_id="AEI91376.1"
FT                   /translation="MSKPQRFRIQSKNYFLTYPKCSITKEEALEQILALDTPTNKKYIR
FT                   VCRELHENGEPHLHALLQFEGKFTCTNCRFFDLRHPRNSNVCHGKYESCRSSSDAKSYV
FT                   EKDGDYIEWGNFQIDGRSARGGKQTANDSYAKALNTSSIEQALDIIKEEQPQHFFLQHH
FT                   NIVANAQRIFKTVPEPWVSPFPLSSFTNVPEEMQAWADDYFGRSAAARPERPISIIIEG
FT                   DSRTGKTMWARALGVHNYLSGHLDFNPKCYSNEAHYNIIDDVDPKYLKMKHWKELIGAQ
FT                   KDWQSNCKYGKPVQIKGGIPCIVLCNPGEGASYKSFLDRPENTGLNNWTKHNAKFVFLN
FT                   TPLYQSAAPSSETTSTCD"
FT   gene            complement(2109. .2366)
FT                   /gene="AC4"
FT   CDS             complement(2109. .2366)
FT                   /codon_start=1
FT                   /gene="AC4"
FT                   /product="AC4 protein"
FT                   /db_xref="UniProtKB/TrEMBL:G9CLX4"
FT                   /protein_id="AEI91379.1"
FT                   /translation="MGSLISMLCCNSKGSSRARIADSSIYDTQEIPMFVMASTNLVGHP
FT                   PTPNHMLRRTEITSNGVIFRSTEDLLEEVNRQLTIHTQRR"
XX
SQ   Sequence 2678 BP; 677 A; 560 C; 612 G; 828 T; 1 other;

jf694468 Length: 2678  25-MAR-2012  Type: N  Check: 2143  ..

       1  acctgagggc cgccctccgg agactcccct tttgacgtgg cgctctctcc
      51  tccgctggat tgtattatct tggagattgg gccggtctct tttgccccac
     101  cttgctttaa tttaaagttg ttaggcccaa tcattttgcg tttcccgagc
     151  ttagatatta ttaaagtctt gggcgccaag ttcgataaag gctataaatt
     201  atatggtgac cactcatgtc actttaattc aaaatgccta agcgcgatgc
     251  cccatggcgc catatgacag ggacgtccaa aattagccgg tccgttaatt
     301  tctcacctcg ttcaagtgtt gggccaagat ccaacaaggc caatgattgg
     351  gttaacaggc ctatgtacag gaagcccaag atatatcgga tgtacaggaa
     401  ccccgatgtt ccaaggggtt gtgaagggcc ttgtaaagtc cagtcttatg
     451  agcaacgtca tgatgtgtca catgttggca aggtgatgtg tgtgtcggac
     501  gtgacacgcg gcaatggtat cacccatcgt gttgggaaac gtttctgtgt
     551  taagtctgta tatattatag gtaagatatg gatggacgag aatatcaagt
     601  tgaagaacca taccaacagt gttatgtttt ggttggtacg agaccgtaga
     651  ccctatggaa cccctatgga ctttggccaa gtgtttaaca tgtttgacaa
     701  tgagcctagt acggctactg ttaagaacga tcttcgtgat cgtttccaag
     751  ttatgcacaa gttttatggc aaagtcactg gtggacagta tgcaagtaat
     801  gaacaggcgc ttgttaagcg cttttggaag gtgaacaact atgtggtgta
     851  caaccatcaa gaagctggga agtatgagaa tcacactgag aacgcattat
     901  tattgtatat ggcatgtact catgcctcta atcctgtgta tgctacgtta
     951  aagatacgga tctattttta cgattcgata tccaattaat aaattttgaa
    1001  ctttattgaa tgttgttcaa gtacatgatg gatatatgct ttgtctgttg
    1051  caaagcgaac tgctctaatt acattgttaa ttgaaattac acctgaacga
    1101  ttgagataca acataactaa atactcaaat ctacttaagt acgctactcc
    1151  agaagccgtc agggaagtcg tccagacttg gaagttcaga taagccttgt
    1201  ggagatccaa cgctttccgc acgttgtggt tgaaccggat ctgaatgtgg
    1251  tatactcgcg tcgatgtgta tctcaggtcc tctactcggt atatcttgaa
    1301  atagagggga tttggtgtct cccagatata gacgccattc tccgcctgag
    1351  gtgcagtgat gagttcccct gtgcgtgaat ccatgacctc tacagtttat
    1401  atggagaaat atggaacagc cacacgatag atcaattcgt cttctcctaa
    1451  tcgcacgttg acgttgtttc gctgctcggt gctgcgcttt gatagagggg
    1501  ggtgttgagg aagacgaatt tcgcattgtg ctttgtccag ttatttaatc
    1551  ctgtattttc gggtctgtct aggaagcttt tatagctggc cccctcgcca
    1601  ggattgcaaa gcacgatgca tgggatacct cctttaattt gaactggttt
    1651  accgtattta caatttgact gccagtcctt ttgggcccca attaactctt
    1701  tccagtgttt catctttaaa tatttggggt ccacgtcatc aataatgttg
    1751  tagtgtgctt cgttggaata gcacttaggg ttaaagtcta ggtgaccact
    1801  taaataattg tggaccccta aagcacgtgc ccacatsgtc ttccctgttc
    1851  gagaatcacc ttcaattatt atactaatag gtctctccgg ccgcgcagcg
    1901  gcacttcttc cgaaataatc gtccgcccaa gcttgcatct cttctggcac
    1951  gttagtgaat gatgataatg gaaacggaga aacccatggc tctggaactg
    2001  ttttaaatat ccgttgagca tttgcaacta tgttgtgatg ttggaggaag
    2051  aagtgttgtg gctgttcctc cttgattata tctagagcct gttctatgga
    2101  cgatgtgttt aacgcctttg cgtatgaatc gttagctgtc tgtttacctc
    2151  ctcgagcaga tcttccgtcg atctgaaaat taccccattc gatgtaatct
    2201  ccgtccttct caacatatga tttggcgtcg gaggatgacc tacaagattc
    2251  gtacttgcca tgacaaacat tggaatttct tgggtgtcgt agatcgaaga
    2301  atctgcaatt cgtgcacgtg aacttccctt cgaattgcag caaagcatgg
    2351  agatgaggct ccccattttc gtgtaactct ctacatacac gaatatattt
    2401  cttgttcgtt ggtgtatcta atgcgagaat ctgttcgaga gcctcttctt
    2451  tggttatgga acattttgga tatgtgagga aataattttt agactgtatt
    2501  ctaaaacgct gaggtttgct catatttgaa cccagaagag tgtctccgga
    2551  tggtgtctcc aactcccccc cttgaaactg ggcttatagt attggagact
    2601  agagtcaata tatatgctag aagatatttg ggttagattg tggtccctac
    2651  acccttgcgg ccctcagtat ataatatt