Sequence of DPV Tomato golden mosaic virus
Tomato golden mosaic virus isolate yvTGMV[92/11] segment DNA-A, complete sequence.
ACC No: JF694490
Dated: 2012-01-02 | Length: 2588 | CRC: 631932876
ID JF694490; SV 1; circular; genomic DNA; STD; VRL; 2588 BP.
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AC JF694490;
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DT 02-JAN-2012 (Rel. 111, Created)
DT 02-JAN-2012 (Rel. 111, Last updated, Version 1)
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DE Tomato golden mosaic virus isolate yvTGMV[92/11] segment DNA-A, complete
DE sequence.
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KW .
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OS Tomato golden mosaic virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-2588
RA Wyant P.S., Kober S., Jeske H., Wege C.;
RT "Tomato golden mosaic virus back in tomatoes";
RL Unpublished.
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RN [2]
RP 1-2588
RA Wyant P.S., Kober S., Jeske H., Wege C.;
RT ;
RL Submitted (15-MAR-2011) to the INSDC.
RL Molecular Biology and Plant Virology, University of Stuttgart,
RL Pfaffenwaldring 57, Stuttgart, Baden-Wurttenberg 70550, Germany
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FH Key Location/Qualifiers
FH
FT source 1. .2588
FT /organism="Tomato golden mosaic virus"
FT /segment="DNA-A"
FT /host="Solanum lycopersicum"
FT /isolate="yvTGMV[92/11]"
FT /mol_type="genomic DNA"
FT /country="Brazil"
FT /db_xref="taxon:10831"
FT gene 189. .932
FT /gene="AV1"
FT CDS 189. .932
FT /codon_start=1
FT /gene="AV1"
FT /product="coat protein"
FT /protein_id="AEI91449.1"
FT /translation="MPKRDAPWRLMAGTSKVSRSANYSPRGSLPKRDAWVNRPMYRKPR
FT IYRSLRGPDVPKGCEGPCKVQSYEQRHDISLVGKVMCISDVTRGNGITHRVGKRFCVKS
FT VYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDL
FT RDRFQVIHRFHAKVTGGQYASNEQALVRRFWKVNNNVVYNHQEAGKYENHTENALLLYM
FT ACTHASNPVYATLKIRIYFYDSITN"
FT gene complement(929. .1327)
FT /gene="AC3"
FT CDS complement(929. .1327)
FT /codon_start=1
FT /gene="AC3"
FT /product="replication enhancer"
FT /protein_id="AEI91452.1"
FT /translation="MDSRTGEPITVPQAENGVYIWEITNPLYFKIISVEDPLYTNTRIY
FT HLQIRFNHNLRRALDLHKAFLNFQVWTTSTTASGRTYLNRFKYLVMLYLEQLGVICINN
FT VIRAVRFATDRSYITHVLENHSIKYKFY"
FT gene complement(1074. .1463)
FT /gene="AC2"
FT CDS complement(1074. .1463)
FT /codon_start=1
FT /gene="AC2"
FT /product="transcriptional regulator"
FT /protein_id="AEI91451.1"
FT /translation="MRNSSSSTPPSIKAQHRAAKRRAIRRRRIDLNCGCSIYIHIDCRN
FT NGFTHRGTYHCASSREWRLYLGDNKSPLFQDNQRRGSPLHQHQDIPLTNQVQPQPEESI
FT GSPQGISQLPSMDDIDDSFWENLFK"
FT gene complement(1405. .2463)
FT /gene="AC1"
FT CDS complement(1405. .2463)
FT /codon_start=1
FT /gene="AC1"
FT /product="replication associated protein"
FT /protein_id="AEI91450.1"
FT /translation="MPSHPKRFQINAKNYFLTYPQCSLSKEESLSQLQALNTPINKKFI
FT KICRELHEDGQPHLHVLIQFEGKYCCQNQRFFDLVSPTRSAHFHPNIQRAKSSSDVKTY
FT IDKDGDTLVWGEFQVDGRSARGGCQTSNDAAAEALNASSKEEALQIIREKIPEKYLFQF
FT HNLNSNLDRIFDKTPEPWLPPFHVSSFTNVPDEMRQWAENYFGKSSAARPERPISIIIE
FT GDSRTGKTMWARSLGPHNYLSGHLDLNSRVYSNKVEYNVIDDVTPQYLKLKHWKELIGA
FT QRDWQTNCKYGKPVQIKGGIPSIVLCNPGEGASYKVFLDKEENTPLKNWTFHNAKFVFL
FT NSPLYQSSTQSS"
FT gene complement(2046. .2309)
FT /gene="AC4"
FT CDS complement(2046. .2309)
FT /codon_start=1
FT /gene="AC4"
FT /product="AC4 protein"
FT /protein_id="AEI91453.1"
FT /translation="MKMGNLTSTCLFSSRENTAAKINDSSTWYPQQGQHISIQTFRELN
FT RLPTSRRTSTKTEILLYGENSRSTVEVLEEVAKHLTTLQQRR"
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SQ Sequence 2588 BP; 673 A; 512 C; 605 G; 798 T; 0 other;
jf694490 Length: 2588 02-JAN-2012 Type: N Check: 5961 ..
1 accggatggc cgcgcgatcg tcacccgacc cgcttccgca aattacgccg
51 cattgtcgtc taagtggtcc cgcatatgtg aagggccaat catatttggc
101 cctgaaatct aagatatttt taaagacttg tggttaagtt gttaaagtta
151 tataaaacga catgcgtttc gtggatcttt aattcaaaat gcctaagcgg
201 gatgccccat ggcgtttaat ggcggggacc tcaaaggttt cccgctctgc
251 taattattct cctcgaggaa gtttgcctaa gcgtgatgct tgggttaaca
301 ggcccatgta caggaagccc aggatatatc gatcactaag aggccccgat
351 gttcctaaag gatgtgaagg gccttgtaaa gtccagtcat acgagcagcg
401 tcatgatatt tccctagttg ggaaggtcat gtgtatatct gatgtgacac
451 gtggtaacgg tattacccac cgtgttggta agcgtttctg cgttaagtct
501 gtatatatct tgggcaagat atggatggat gagaacatca agttgaagaa
551 tcacacgaac agtgtcatgt tctggttggt tagggatcgg agaccttatg
601 gcactcctat ggatttcgga caagtgttca acatgttcga taatgagcca
651 agtactgcaa cggtaaagaa cgacctacgg gatcgtttcc aagtgatcca
701 caggtttcac gccaaggtta ctggtggtca atatgccagc aacgagcagg
751 ctctggttag gagattctgg aaggtcaata acaatgtcgt ctacaaccac
801 caggaggcag ggaaatatga gaatcatact gagaacgccc tgttattgta
851 tatggcatgt actcatgcct ctaaccctgt gtatgcgacg ttgaaaattc
901 gaatctattt ttatgattcg ataacaaatt aataaaattt atattttatt
951 gaatgatttt cgagtacatg cgttatatat gatctgtctg ttgcgaaacg
1001 aacagctcta ataacattgt taatacatat aacgcctaac tgttcaaggt
1051 acaacatcac taagtattta aatctattta aataagttct cccagaagct
1101 gtcgtcgatg tcgtccatac ttggaagttg agaaatgcct tgtggagatc
1151 caatgctctc ctcaggttgt ggttgaacct gatttgtaag tggtatatcc
1201 tggtgttggt gtagagggga tcctctacgc tgattatctt gaaatagagg
1251 ggatttgtta tctcccagat atagacgcca ttctctgctt gaggcacagt
1301 gataggttcc cctgtgcgtg aatccattgt ttctgcagtc gatgtgaatg
1351 tatatggaac agccacagtt caggtcaatt cgtcgccttc taatagctct
1401 tcgtttagct gctctgtgtt gagctttgat agagggggga gttgaggaag
1451 acgaatttcg cattatggaa agtccagttc tttagtggag tgttttcctc
1501 tttgtcgagg aaaactttat agctagcacc ctctccagga ttgcacagca
1551 cgattgacgg gatacctcct ttaatttgaa ctggctttcc gtatttacag
1601 ttagtctgcc aatctctttg ggccccaatg agttctttcc aatgtttcaa
1651 ctttagatat tgcggtgtga catcatcgat gacgttatac tcaaccttgt
1701 ttgagtaaac cctagaattg agatccaaat gaccgctcaa ataattatgt
1751 gggcctagtg aacgagccca catagtcttt cccgtccgac tatcgccctc
1801 gatgataata ctaataggtc tctccggccg cgcagcggaa ctctttccaa
1851 aataattttc agcccattgt ctcatctcgt ctggcacgtt agtaaatgat
1901 gagacgtgga acggaggaag ccatggttca ggagtcttat caaatatcct
1951 atctaaattg ctatttagat tgtggaactg aaataaatat ttttctggga
2001 ttttctctct aattatctgc agggcttctt ctttggaaga agcatttaac
2051 gcctctgctg cagcgtcgtt agatgtttgg caacctcctc tagcacttcg
2101 accgtcgacc tggaattctc cccatacaag agtatctccg tctttgtcga
2151 tgtacgtctt gacgtcggaa gacgatttag ctctctgaat gtttggatgg
2201 aaatgtgctg accttgttgg ggataccagg tcgaagaatc gttgattttg
2251 gcagcagtat tttccctcga actgaataag cacgtggagg tgaggttgcc
2301 catcttcatg aagctctctg cagattttta tgaatttttt gttaatcgga
2351 gtgtttaggg cttgtaattg agaaagtgat tcttctttgg acaaggagca
2401 ctgaggatat gtaagaaaat aatttttggc atttatttga aaccgttttg
2451 gatgcgatgg catttttgta attaagaggc ttactaccaa ttgaggaggg
2501 gctccaaaag ttatatgaat tggtagtaag gtagctctta tatattagaa
2551 gttcctaagg ggcacgtggc ggccatccgt ttaatatt