Sequence of DPV Tomato golden mosaic virus
Tomato golden mosaic virus isolate yvTGMV[92/11] segment DNA-A, complete sequence.
ACC No: JF694490
Dated: 2012-01-02 | Length: 2588 | CRC: 631932876
ID JF694490; SV 1; circular; genomic DNA; STD; VRL; 2588 BP. XX AC JF694490; XX DT 02-JAN-2012 (Rel. 111, Created) DT 02-JAN-2012 (Rel. 111, Last updated, Version 1) XX DE Tomato golden mosaic virus isolate yvTGMV[92/11] segment DNA-A, complete DE sequence. XX KW . XX OS Tomato golden mosaic virus OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2588 RA Wyant P.S., Kober S., Jeske H., Wege C.; RT "Tomato golden mosaic virus back in tomatoes"; RL Unpublished. XX RN [2] RP 1-2588 RA Wyant P.S., Kober S., Jeske H., Wege C.; RT ; RL Submitted (15-MAR-2011) to the INSDC. RL Molecular Biology and Plant Virology, University of Stuttgart, RL Pfaffenwaldring 57, Stuttgart, Baden-Wurttenberg 70550, Germany XX FH Key Location/Qualifiers FH FT source 1. .2588 FT /organism="Tomato golden mosaic virus" FT /segment="DNA-A" FT /host="Solanum lycopersicum" FT /isolate="yvTGMV[92/11]" FT /mol_type="genomic DNA" FT /country="Brazil" FT /db_xref="taxon:10831" FT gene 189. .932 FT /gene="AV1" FT CDS 189. .932 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /protein_id="AEI91449.1" FT /translation="MPKRDAPWRLMAGTSKVSRSANYSPRGSLPKRDAWVNRPMYRKPR FT IYRSLRGPDVPKGCEGPCKVQSYEQRHDISLVGKVMCISDVTRGNGITHRVGKRFCVKS FT VYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDL FT RDRFQVIHRFHAKVTGGQYASNEQALVRRFWKVNNNVVYNHQEAGKYENHTENALLLYM FT ACTHASNPVYATLKIRIYFYDSITN" FT gene complement(929. .1327) FT /gene="AC3" FT CDS complement(929. .1327) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer" FT /protein_id="AEI91452.1" FT /translation="MDSRTGEPITVPQAENGVYIWEITNPLYFKIISVEDPLYTNTRIY FT HLQIRFNHNLRRALDLHKAFLNFQVWTTSTTASGRTYLNRFKYLVMLYLEQLGVICINN FT VIRAVRFATDRSYITHVLENHSIKYKFY" FT gene complement(1074. .1463) FT /gene="AC2" FT CDS complement(1074. .1463) FT /codon_start=1 FT /gene="AC2" FT /product="transcriptional regulator" FT /protein_id="AEI91451.1" FT /translation="MRNSSSSTPPSIKAQHRAAKRRAIRRRRIDLNCGCSIYIHIDCRN FT NGFTHRGTYHCASSREWRLYLGDNKSPLFQDNQRRGSPLHQHQDIPLTNQVQPQPEESI FT GSPQGISQLPSMDDIDDSFWENLFK" FT gene complement(1405. .2463) FT /gene="AC1" FT CDS complement(1405. .2463) FT /codon_start=1 FT /gene="AC1" FT /product="replication associated protein" FT /protein_id="AEI91450.1" FT /translation="MPSHPKRFQINAKNYFLTYPQCSLSKEESLSQLQALNTPINKKFI FT KICRELHEDGQPHLHVLIQFEGKYCCQNQRFFDLVSPTRSAHFHPNIQRAKSSSDVKTY FT IDKDGDTLVWGEFQVDGRSARGGCQTSNDAAAEALNASSKEEALQIIREKIPEKYLFQF FT HNLNSNLDRIFDKTPEPWLPPFHVSSFTNVPDEMRQWAENYFGKSSAARPERPISIIIE FT GDSRTGKTMWARSLGPHNYLSGHLDLNSRVYSNKVEYNVIDDVTPQYLKLKHWKELIGA FT QRDWQTNCKYGKPVQIKGGIPSIVLCNPGEGASYKVFLDKEENTPLKNWTFHNAKFVFL FT NSPLYQSSTQSS" FT gene complement(2046. .2309) FT /gene="AC4" FT CDS complement(2046. .2309) FT /codon_start=1 FT /gene="AC4" FT /product="AC4 protein" FT /protein_id="AEI91453.1" FT /translation="MKMGNLTSTCLFSSRENTAAKINDSSTWYPQQGQHISIQTFRELN FT RLPTSRRTSTKTEILLYGENSRSTVEVLEEVAKHLTTLQQRR" XX SQ Sequence 2588 BP; 673 A; 512 C; 605 G; 798 T; 0 other; jf694490 Length: 2588 02-JAN-2012 Type: N Check: 5961 .. 1 accggatggc cgcgcgatcg tcacccgacc cgcttccgca aattacgccg 51 cattgtcgtc taagtggtcc cgcatatgtg aagggccaat catatttggc 101 cctgaaatct aagatatttt taaagacttg tggttaagtt gttaaagtta 151 tataaaacga catgcgtttc gtggatcttt aattcaaaat gcctaagcgg 201 gatgccccat ggcgtttaat ggcggggacc tcaaaggttt cccgctctgc 251 taattattct cctcgaggaa gtttgcctaa gcgtgatgct tgggttaaca 301 ggcccatgta caggaagccc aggatatatc gatcactaag aggccccgat 351 gttcctaaag gatgtgaagg gccttgtaaa gtccagtcat acgagcagcg 401 tcatgatatt tccctagttg ggaaggtcat gtgtatatct gatgtgacac 451 gtggtaacgg tattacccac cgtgttggta agcgtttctg cgttaagtct 501 gtatatatct tgggcaagat atggatggat gagaacatca agttgaagaa 551 tcacacgaac agtgtcatgt tctggttggt tagggatcgg agaccttatg 601 gcactcctat ggatttcgga caagtgttca acatgttcga taatgagcca 651 agtactgcaa cggtaaagaa cgacctacgg gatcgtttcc aagtgatcca 701 caggtttcac gccaaggtta ctggtggtca atatgccagc aacgagcagg 751 ctctggttag gagattctgg aaggtcaata acaatgtcgt ctacaaccac 801 caggaggcag ggaaatatga gaatcatact gagaacgccc tgttattgta 851 tatggcatgt actcatgcct ctaaccctgt gtatgcgacg ttgaaaattc 901 gaatctattt ttatgattcg ataacaaatt aataaaattt atattttatt 951 gaatgatttt cgagtacatg cgttatatat gatctgtctg ttgcgaaacg 1001 aacagctcta ataacattgt taatacatat aacgcctaac tgttcaaggt 1051 acaacatcac taagtattta aatctattta aataagttct cccagaagct 1101 gtcgtcgatg tcgtccatac ttggaagttg agaaatgcct tgtggagatc 1151 caatgctctc ctcaggttgt ggttgaacct gatttgtaag tggtatatcc 1201 tggtgttggt gtagagggga tcctctacgc tgattatctt gaaatagagg 1251 ggatttgtta tctcccagat atagacgcca ttctctgctt gaggcacagt 1301 gataggttcc cctgtgcgtg aatccattgt ttctgcagtc gatgtgaatg 1351 tatatggaac agccacagtt caggtcaatt cgtcgccttc taatagctct 1401 tcgtttagct gctctgtgtt gagctttgat agagggggga gttgaggaag 1451 acgaatttcg cattatggaa agtccagttc tttagtggag tgttttcctc 1501 tttgtcgagg aaaactttat agctagcacc ctctccagga ttgcacagca 1551 cgattgacgg gatacctcct ttaatttgaa ctggctttcc gtatttacag 1601 ttagtctgcc aatctctttg ggccccaatg agttctttcc aatgtttcaa 1651 ctttagatat tgcggtgtga catcatcgat gacgttatac tcaaccttgt 1701 ttgagtaaac cctagaattg agatccaaat gaccgctcaa ataattatgt 1751 gggcctagtg aacgagccca catagtcttt cccgtccgac tatcgccctc 1801 gatgataata ctaataggtc tctccggccg cgcagcggaa ctctttccaa 1851 aataattttc agcccattgt ctcatctcgt ctggcacgtt agtaaatgat 1901 gagacgtgga acggaggaag ccatggttca ggagtcttat caaatatcct 1951 atctaaattg ctatttagat tgtggaactg aaataaatat ttttctggga 2001 ttttctctct aattatctgc agggcttctt ctttggaaga agcatttaac 2051 gcctctgctg cagcgtcgtt agatgtttgg caacctcctc tagcacttcg 2101 accgtcgacc tggaattctc cccatacaag agtatctccg tctttgtcga 2151 tgtacgtctt gacgtcggaa gacgatttag ctctctgaat gtttggatgg 2201 aaatgtgctg accttgttgg ggataccagg tcgaagaatc gttgattttg 2251 gcagcagtat tttccctcga actgaataag cacgtggagg tgaggttgcc 2301 catcttcatg aagctctctg cagattttta tgaatttttt gttaatcgga 2351 gtgtttaggg cttgtaattg agaaagtgat tcttctttgg acaaggagca 2401 ctgaggatat gtaagaaaat aatttttggc atttatttga aaccgttttg 2451 gatgcgatgg catttttgta attaagaggc ttactaccaa ttgaggaggg 2501 gctccaaaag ttatatgaat tggtagtaag gtagctctta tatattagaa 2551 gttcctaagg ggcacgtggc ggccatccgt ttaatatt