Sequence of DPV Potato yellow vein virus
Potato yellow vein virus clone 1105c coat protein (cp) gene, complete cds.
ACC No: JF718303
Dated: 2011-05-01 | Length: 768 | CRC: -1342497321
ID JF718303; SV 1; linear; genomic RNA; STD; VRL; 768 BP. XX AC JF718303; XX DT 01-MAY-2011 (Rel. 108, Created) DT 01-MAY-2011 (Rel. 108, Last updated, Version 1) XX DE Potato yellow vein virus clone 1105c coat protein (cp) gene, complete cds. XX KW . XX OS Potato yellow vein virus OC Viruses; ssRNA positive-strand viruses, no DNA stage; Closteroviridae; OC Crinivirus. XX RN [1] RP 1-768 RA Rodriguez-Burgos P., Chaves G., Franco-Lara L., Guzman-Barney M.; RT "Low molecular variability of Potato yellow vein virus (PYVV) isolates of RT Solanum phureja and Solanum tuberosum from Colombia"; RL Phytopathology 100(6):S176-S176(2010). XX RN [2] RP 1-768 RA Rodriguez-Burgos P., Franco-Lara L., Guzman-Barney M.; RT ; RL Submitted (20-MAR-2011) to the EMBL/GenBank/DDBJ databases. RL Biotechnology Institute, National University of Colombia, Carrera 30 45-03, RL Bogota 111321, Colombia XX FH Key Location/Qualifiers FH FT source 1. .768 FT /organism="Potato yellow vein virus" FT /host="Solanum phureja" FT /isolate="1105" FT /mol_type="genomic RNA" FT /country="Colombia:Antioquia, Marinilla" FT /collection_date="May-2008" FT /identified_by="P. Rodriguez-Burgos" FT /clone="1105c" FT /db_xref="taxon:103881" FT gene 1. .768 FT /gene="cp" FT CDS 1. .768 FT /codon_start=1 FT /gene="cp" FT /product="coat protein" FT /protein_id="AEC22849.1" FT /translation="MDPHGNPIVEPESSNSPESAGVSFTDSQKPPVDRKVKDDSYNLDL FT LISNVGRRDDIISPDDMSLDKLSKIQVRADRGDVLDDEDKLVFEGCLKNFCKRLTGVDP FT DPETFLGFFMSVAQMSLNQSTSVKNRKNLQLKNYLKIGDKEYIWKTADLLNYLSGQFPN FT KSNPLRQYMRLCENQIEKLKSSGKIVSDGHLAAKHGTTSQYFSSVGDYVNGSKTNISDD FT DLTANYLFKNAATKSTKKTKSIYNVAQLAGSIE" XX SQ Sequence 768 BP; 252 A; 127 C; 161 G; 228 T; 0 other; jf718303 Length: 768 01-MAY-2011 Type: N Check: 6468 .. 1 atggatcctc atggaaatcc gatcgtggaa cctgagtcta gtaactcccc 51 tgaatctgca ggtgtgtcat ttaccgattc acaaaaacct cctgtagatc 101 ggaaagtaaa agatgactcg tacaatttag atctcttgat ctccaatgtt 151 gggagacggg atgatattat atctcctgat gatatgagtc ttgacaaact 201 ttcaaagatt caggttagag cagacagagg agatgtcttg gatgatgaag 251 ataaattagt ctttgaaggt tgtttgaaga acttttgcaa aagattgact 301 ggagttgatc cagatcctga gacctttctt gggttcttca tgagtgtagc 351 tcaaatgtca ttaaatcaat ctacttctgt taaaaacaga aagaatctcc 401 agttgaagaa ttatttaaaa ataggagata aagaatatat ttggaagacc 451 gccgacttgt tgaattactt gtctggacag tttccgaata agagtaatcc 501 actgagacaa tatatgagat tgtgcgaaaa tcaaattgaa aagctgaaat 551 cttctggtaa gatagtcagt gatggtcatc tcgctgccaa acatggtacg 601 acctctcagt atttctcgtc agtcggagat tatgtcaatg gttcgaaaac 651 caatatttct gatgatgatt tgactgcaaa ttacctgttc aagaatgcag 701 caactaagag tactaagaag acaaaatcaa tttataatgt cgctcaatta 751 gcaggatcta ttgagtag